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Re-annotation of 12,495 prokaryotic 16S rRNA 3’ ends and analysis of Shine-Dalgarno and anti-Shine-Dalgarno sequences

We examined 20,648 prokaryotic unique taxids with respect to the annotation of the 3’ end of the 16S rRNA, which contains the anti-Shine-Dalgarno sequence. We used the sequence of highly conserved helix 45 of the 16S rRNA as a guide. By this criterion, 8,153 annotated 3’ ends correctly included the...

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Detalles Bibliográficos
Autores principales: Amin, Mohammad Ruhul, Yurovsky, Alisa, Chen, Yuping, Skiena, Steve, Futcher, Bruce
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6107228/
https://www.ncbi.nlm.nih.gov/pubmed/30138483
http://dx.doi.org/10.1371/journal.pone.0202767

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