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PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma

PURPOSE: To create an interactive web-based tool for the Prediction of Risk of Metastasis in Uveal Melanoma (PRiMeUM) that can provide a personalized risk estimate of developing metastases within 48 months of primary uveal melanoma (UM) treatment. The model utilizes routinely collected clinical and...

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Autores principales: Vaquero-Garcia, Jorge, Lalonde, Emilie, Ewens, Kathryn G., Ebrahimzadeh, Jessica, Richard-Yutz, Jennifer, Shields, Carol L., Barrera, Alejandro, Green, Christopher J., Barash, Yoseph, Ganguly, Arupa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6108308/
https://www.ncbi.nlm.nih.gov/pubmed/28828481
http://dx.doi.org/10.1167/iovs.17-22255
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author Vaquero-Garcia, Jorge
Lalonde, Emilie
Ewens, Kathryn G.
Ebrahimzadeh, Jessica
Richard-Yutz, Jennifer
Shields, Carol L.
Barrera, Alejandro
Green, Christopher J.
Barash, Yoseph
Ganguly, Arupa
author_facet Vaquero-Garcia, Jorge
Lalonde, Emilie
Ewens, Kathryn G.
Ebrahimzadeh, Jessica
Richard-Yutz, Jennifer
Shields, Carol L.
Barrera, Alejandro
Green, Christopher J.
Barash, Yoseph
Ganguly, Arupa
author_sort Vaquero-Garcia, Jorge
collection PubMed
description PURPOSE: To create an interactive web-based tool for the Prediction of Risk of Metastasis in Uveal Melanoma (PRiMeUM) that can provide a personalized risk estimate of developing metastases within 48 months of primary uveal melanoma (UM) treatment. The model utilizes routinely collected clinical and tumor characteristics on 1227 UM, with the option of including chromosome information when available. METHODS: Using a cohort of 1227 UM cases, Cox proportional hazard modeling was used to assess significant predictors of metastasis including clinical and chromosomal characteristics. A multivariate model to predict risk of metastasis was evaluated using machine learning methods including logistic regression, decision trees, survival random forest, and survival-based regression models. Based on cross-validation results, a logistic regression classifier was developed to compute an individualized risk of metastasis based on clinical and chromosomal information. RESULTS: The PRiMeUM model provides prognostic information for personalized risk of metastasis in UM. The accuracy of the risk prediction ranged between 80% (using chromosomal features only), 83% using clinical features only (age, sex, tumor location, and size), and 85% (clinical and chromosomal information). Kaplan-Meier analysis showed these risk scores to be highly predictive of metastasis (P < 0.0001). CONCLUSIONS: PRiMeUM provides a tool for predicting an individual's personal risk of metastasis based on their individual and tumor characteristics. It will aid physicians with decisions concerning frequency of systemic surveillance and can be used as a criterion for entering clinical trials for adjuvant therapies.
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spelling pubmed-61083082018-08-29 PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma Vaquero-Garcia, Jorge Lalonde, Emilie Ewens, Kathryn G. Ebrahimzadeh, Jessica Richard-Yutz, Jennifer Shields, Carol L. Barrera, Alejandro Green, Christopher J. Barash, Yoseph Ganguly, Arupa Invest Ophthalmol Vis Sci Anatomy and Pathology/Oncology PURPOSE: To create an interactive web-based tool for the Prediction of Risk of Metastasis in Uveal Melanoma (PRiMeUM) that can provide a personalized risk estimate of developing metastases within 48 months of primary uveal melanoma (UM) treatment. The model utilizes routinely collected clinical and tumor characteristics on 1227 UM, with the option of including chromosome information when available. METHODS: Using a cohort of 1227 UM cases, Cox proportional hazard modeling was used to assess significant predictors of metastasis including clinical and chromosomal characteristics. A multivariate model to predict risk of metastasis was evaluated using machine learning methods including logistic regression, decision trees, survival random forest, and survival-based regression models. Based on cross-validation results, a logistic regression classifier was developed to compute an individualized risk of metastasis based on clinical and chromosomal information. RESULTS: The PRiMeUM model provides prognostic information for personalized risk of metastasis in UM. The accuracy of the risk prediction ranged between 80% (using chromosomal features only), 83% using clinical features only (age, sex, tumor location, and size), and 85% (clinical and chromosomal information). Kaplan-Meier analysis showed these risk scores to be highly predictive of metastasis (P < 0.0001). CONCLUSIONS: PRiMeUM provides a tool for predicting an individual's personal risk of metastasis based on their individual and tumor characteristics. It will aid physicians with decisions concerning frequency of systemic surveillance and can be used as a criterion for entering clinical trials for adjuvant therapies. The Association for Research in Vision and Ophthalmology 2017-08 /pmc/articles/PMC6108308/ /pubmed/28828481 http://dx.doi.org/10.1167/iovs.17-22255 Text en Copyright 2017 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Anatomy and Pathology/Oncology
Vaquero-Garcia, Jorge
Lalonde, Emilie
Ewens, Kathryn G.
Ebrahimzadeh, Jessica
Richard-Yutz, Jennifer
Shields, Carol L.
Barrera, Alejandro
Green, Christopher J.
Barash, Yoseph
Ganguly, Arupa
PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma
title PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma
title_full PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma
title_fullStr PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma
title_full_unstemmed PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma
title_short PRiMeUM: A Model for Predicting Risk of Metastasis in Uveal Melanoma
title_sort primeum: a model for predicting risk of metastasis in uveal melanoma
topic Anatomy and Pathology/Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6108308/
https://www.ncbi.nlm.nih.gov/pubmed/28828481
http://dx.doi.org/10.1167/iovs.17-22255
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