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Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction

Feed-forward loops (FFLs) are three-gene modules that exert significant effects on a series of biological processes and carcinogenesis development. MicroRNA-associated FFLs (miR-FFLs) represent a new era in disease research. However, analysis of the miR-FFL network motifs has yet to be systematicall...

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Autores principales: Qu, Wenbo, Shi, Shuai, Sun, Lixiu, Zhang, Fan, Zhang, Shengming, Mu, Shuainan, Zhao, Yanru, Liu, Bingchen, Cao, Xue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6108862/
https://www.ncbi.nlm.nih.gov/pubmed/30066833
http://dx.doi.org/10.3892/ijmm.2018.3790
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author Qu, Wenbo
Shi, Shuai
Sun, Lixiu
Zhang, Fan
Zhang, Shengming
Mu, Shuainan
Zhao, Yanru
Liu, Bingchen
Cao, Xue
author_facet Qu, Wenbo
Shi, Shuai
Sun, Lixiu
Zhang, Fan
Zhang, Shengming
Mu, Shuainan
Zhao, Yanru
Liu, Bingchen
Cao, Xue
author_sort Qu, Wenbo
collection PubMed
description Feed-forward loops (FFLs) are three-gene modules that exert significant effects on a series of biological processes and carcinogenesis development. MicroRNA-associated FFLs (miR-FFLs) represent a new era in disease research. However, analysis of the miR-FFL network motifs has yet to be systematically performed, and their potential role in cardiac hypertrophy and acute myocardial infarction (AMI) requires investigation. The present study used a computational method to establish a comprehensive miR-FFL network for cardiac hypertrophy and AMI, by integrating high-throughput data from different sources and performing multi-aspect analysis of the network features. Several heart disease-associated miR-FFL motifs were identified that were specific or common to the two diseases investigated. Functional analysis further revealed that miR-FFL motifs provided specific drug targets for the clinical treatment of cardiac hypertrophy and AMI. Associations between specific drugs associated with heart disease and dysregulated FFLs were also identified. The present study highlighted the components of FFL motifs in cardiac hypertrophy and AMI, and revealed their possibility as heart disease biomarkers and novel treatment targets.
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spelling pubmed-61088622018-08-27 Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction Qu, Wenbo Shi, Shuai Sun, Lixiu Zhang, Fan Zhang, Shengming Mu, Shuainan Zhao, Yanru Liu, Bingchen Cao, Xue Int J Mol Med Articles Feed-forward loops (FFLs) are three-gene modules that exert significant effects on a series of biological processes and carcinogenesis development. MicroRNA-associated FFLs (miR-FFLs) represent a new era in disease research. However, analysis of the miR-FFL network motifs has yet to be systematically performed, and their potential role in cardiac hypertrophy and acute myocardial infarction (AMI) requires investigation. The present study used a computational method to establish a comprehensive miR-FFL network for cardiac hypertrophy and AMI, by integrating high-throughput data from different sources and performing multi-aspect analysis of the network features. Several heart disease-associated miR-FFL motifs were identified that were specific or common to the two diseases investigated. Functional analysis further revealed that miR-FFL motifs provided specific drug targets for the clinical treatment of cardiac hypertrophy and AMI. Associations between specific drugs associated with heart disease and dysregulated FFLs were also identified. The present study highlighted the components of FFL motifs in cardiac hypertrophy and AMI, and revealed their possibility as heart disease biomarkers and novel treatment targets. D.A. Spandidos 2018-10 2018-07-20 /pmc/articles/PMC6108862/ /pubmed/30066833 http://dx.doi.org/10.3892/ijmm.2018.3790 Text en Copyright: © Qu et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Qu, Wenbo
Shi, Shuai
Sun, Lixiu
Zhang, Fan
Zhang, Shengming
Mu, Shuainan
Zhao, Yanru
Liu, Bingchen
Cao, Xue
Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction
title Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction
title_full Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction
title_fullStr Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction
title_full_unstemmed Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction
title_short Construction of a microRNA-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction
title_sort construction of a microrna-associated feed-forward loop network that identifies regulators of cardiac hypertrophy and acute myocardial infarction
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6108862/
https://www.ncbi.nlm.nih.gov/pubmed/30066833
http://dx.doi.org/10.3892/ijmm.2018.3790
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