Cargando…
Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication
Bar-HRM is a hybrid method which combines DNA barcoding and High Resolution Melting analysis. It has proven to be a fast, cost-effective and reliable molecular approach for species identification and authentication. Here, three aspects of the use of Bar-HRM are focused on. First, Bar-HRM is used to...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6109059/ https://www.ncbi.nlm.nih.gov/pubmed/30143746 http://dx.doi.org/10.1038/s41598-018-31164-4 |
_version_ | 1783350248720039936 |
---|---|
author | Osathanunkul, Maslin Osathanunkul, Khukrit Wongwanakul, Sutthipan Osathanunkul, Rossarin Madesis, Panagiotis |
author_facet | Osathanunkul, Maslin Osathanunkul, Khukrit Wongwanakul, Sutthipan Osathanunkul, Rossarin Madesis, Panagiotis |
author_sort | Osathanunkul, Maslin |
collection | PubMed |
description | Bar-HRM is a hybrid method which combines DNA barcoding and High Resolution Melting analysis. It has proven to be a fast, cost-effective and reliable molecular approach for species identification and authentication. Here, three aspects of the use of Bar-HRM are focused on. First, Bar-HRM is used to discriminate between closely related Ophiocordyceps species. Second, identification of an unknown powder that is claimed to be Ophiocordyceps species using Bar-HRM. Third, authenticating the O. sinensis products sold on the market by the Bar-HRM. Results from HRM analyses with ITS primers shows that the two Ophiocordyceps species (Ophiocordyceps sinensis and Ophiocordyceps militaris) were easily differentiated. Also, an unknown sample was able to be identified in less time compared with using DNA barcoding alone. In addition, the substitution or adulteration of O. sinensis products sold on market was detected via Bar-HRM. The substitution or adulteration of inferior Ophiocordyceps species, particularly O. militaris in high price O. sinensis products has been a concern throughout Asia. Based on our results, the Bar-HRM was again proved to be a promising tool for species identification and authentication. |
format | Online Article Text |
id | pubmed-6109059 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-61090592018-08-31 Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication Osathanunkul, Maslin Osathanunkul, Khukrit Wongwanakul, Sutthipan Osathanunkul, Rossarin Madesis, Panagiotis Sci Rep Article Bar-HRM is a hybrid method which combines DNA barcoding and High Resolution Melting analysis. It has proven to be a fast, cost-effective and reliable molecular approach for species identification and authentication. Here, three aspects of the use of Bar-HRM are focused on. First, Bar-HRM is used to discriminate between closely related Ophiocordyceps species. Second, identification of an unknown powder that is claimed to be Ophiocordyceps species using Bar-HRM. Third, authenticating the O. sinensis products sold on the market by the Bar-HRM. Results from HRM analyses with ITS primers shows that the two Ophiocordyceps species (Ophiocordyceps sinensis and Ophiocordyceps militaris) were easily differentiated. Also, an unknown sample was able to be identified in less time compared with using DNA barcoding alone. In addition, the substitution or adulteration of O. sinensis products sold on market was detected via Bar-HRM. The substitution or adulteration of inferior Ophiocordyceps species, particularly O. militaris in high price O. sinensis products has been a concern throughout Asia. Based on our results, the Bar-HRM was again proved to be a promising tool for species identification and authentication. Nature Publishing Group UK 2018-08-24 /pmc/articles/PMC6109059/ /pubmed/30143746 http://dx.doi.org/10.1038/s41598-018-31164-4 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Osathanunkul, Maslin Osathanunkul, Khukrit Wongwanakul, Sutthipan Osathanunkul, Rossarin Madesis, Panagiotis Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication |
title | Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication |
title_full | Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication |
title_fullStr | Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication |
title_full_unstemmed | Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication |
title_short | Multiuse of Bar-HRM for Ophiocordyceps sinensis identification and authentication |
title_sort | multiuse of bar-hrm for ophiocordyceps sinensis identification and authentication |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6109059/ https://www.ncbi.nlm.nih.gov/pubmed/30143746 http://dx.doi.org/10.1038/s41598-018-31164-4 |
work_keys_str_mv | AT osathanunkulmaslin multiuseofbarhrmforophiocordycepssinensisidentificationandauthentication AT osathanunkulkhukrit multiuseofbarhrmforophiocordycepssinensisidentificationandauthentication AT wongwanakulsutthipan multiuseofbarhrmforophiocordycepssinensisidentificationandauthentication AT osathanunkulrossarin multiuseofbarhrmforophiocordycepssinensisidentificationandauthentication AT madesispanagiotis multiuseofbarhrmforophiocordycepssinensisidentificationandauthentication |