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Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population

Congenital hand malformations is rare and characterized by hand deformities. It is highly heterogeneous, both clinically and genetically, which complicates the identification of causative genes and mutations. Recently, targeted next-generation (NGS) sequencing has been successfully used for the dete...

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Autores principales: Qin, Litao, Lou, Guiyu, Guo, Liangjie, Zhang, Yuwei, Wang, Hongdan, Wang, Li, Hou, Qiaofang, Liu, Hongyan, Li, Xichuan, Liao, Shixiu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6109141/
https://www.ncbi.nlm.nih.gov/pubmed/30143665
http://dx.doi.org/10.1038/s41598-018-30940-6
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author Qin, Litao
Lou, Guiyu
Guo, Liangjie
Zhang, Yuwei
Wang, Hongdan
Wang, Li
Hou, Qiaofang
Liu, Hongyan
Li, Xichuan
Liao, Shixiu
author_facet Qin, Litao
Lou, Guiyu
Guo, Liangjie
Zhang, Yuwei
Wang, Hongdan
Wang, Li
Hou, Qiaofang
Liu, Hongyan
Li, Xichuan
Liao, Shixiu
author_sort Qin, Litao
collection PubMed
description Congenital hand malformations is rare and characterized by hand deformities. It is highly heterogeneous, both clinically and genetically, which complicates the identification of causative genes and mutations. Recently, targeted next-generation (NGS) sequencing has been successfully used for the detection of heterogeneous diseases, and the use of NGS also has contributed significantly in evaluating the etiology of heterogeneous disease. Here, we employed targeted NGS to screen 248 genes involved in genetic skeletal disorders, including congenital hand malformations. Three pathogenic mutations located in the GJA1, ROR2 and TBX5 genes were detected in three large Chinese families with congenital hand malformations. Two novel mutations were reported, and a known causative mutation was verified in this Chinese population. This is also the first report that the same panel of targeted NGS was employed to perform molecular diagnosis of different subtypes of congenital hand malformations. Our study supported the application of a targeted NGS panel as an effective tool to detect the genetic cause for heterogeneous diseases in clinical diagnosis.
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spelling pubmed-61091412018-08-31 Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population Qin, Litao Lou, Guiyu Guo, Liangjie Zhang, Yuwei Wang, Hongdan Wang, Li Hou, Qiaofang Liu, Hongyan Li, Xichuan Liao, Shixiu Sci Rep Article Congenital hand malformations is rare and characterized by hand deformities. It is highly heterogeneous, both clinically and genetically, which complicates the identification of causative genes and mutations. Recently, targeted next-generation (NGS) sequencing has been successfully used for the detection of heterogeneous diseases, and the use of NGS also has contributed significantly in evaluating the etiology of heterogeneous disease. Here, we employed targeted NGS to screen 248 genes involved in genetic skeletal disorders, including congenital hand malformations. Three pathogenic mutations located in the GJA1, ROR2 and TBX5 genes were detected in three large Chinese families with congenital hand malformations. Two novel mutations were reported, and a known causative mutation was verified in this Chinese population. This is also the first report that the same panel of targeted NGS was employed to perform molecular diagnosis of different subtypes of congenital hand malformations. Our study supported the application of a targeted NGS panel as an effective tool to detect the genetic cause for heterogeneous diseases in clinical diagnosis. Nature Publishing Group UK 2018-08-24 /pmc/articles/PMC6109141/ /pubmed/30143665 http://dx.doi.org/10.1038/s41598-018-30940-6 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Qin, Litao
Lou, Guiyu
Guo, Liangjie
Zhang, Yuwei
Wang, Hongdan
Wang, Li
Hou, Qiaofang
Liu, Hongyan
Li, Xichuan
Liao, Shixiu
Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population
title Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population
title_full Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population
title_fullStr Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population
title_full_unstemmed Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population
title_short Targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in Chinese population
title_sort targeted next-generation sequencing-based molecular diagnosis of congenital hand malformations in chinese population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6109141/
https://www.ncbi.nlm.nih.gov/pubmed/30143665
http://dx.doi.org/10.1038/s41598-018-30940-6
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