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Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae)
PREMISE OF THE STUDY: Microsatellite primers were developed for the gynodioecious Chinese endemic Thalictrum smithii (Ranunculaceae). METHODS AND RESULTS: Thirty‐nine microsatellite primers were developed using the Fast Isolation by AFLP of Sequences COntaining repeats (FIASCO) method. Thirteen micr...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6110242/ https://www.ncbi.nlm.nih.gov/pubmed/30214839 http://dx.doi.org/10.1002/aps3.1176 |
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author | Du, Bin‐Bin Zhan, Ya Li, Jiao‐Kun Chen, Ying‐Zhuo Tang, Lu‐Lu |
author_facet | Du, Bin‐Bin Zhan, Ya Li, Jiao‐Kun Chen, Ying‐Zhuo Tang, Lu‐Lu |
author_sort | Du, Bin‐Bin |
collection | PubMed |
description | PREMISE OF THE STUDY: Microsatellite primers were developed for the gynodioecious Chinese endemic Thalictrum smithii (Ranunculaceae). METHODS AND RESULTS: Thirty‐nine microsatellite primers were developed using the Fast Isolation by AFLP of Sequences COntaining repeats (FIASCO) method. Thirteen microsatellite loci were found to be highly polymorphic after screening 114 specimens (60 hermaphrodite and 54 female) from three T. smithii populations. The number of alleles per locus ranged from three to 13, and the levels of observed and expected heterozygosity per locus ranged from 0.000 to 1.000 and from 0.204 to 0.834, respectively. Twenty‐six of these primers were polymorphic in T. petaloideum and T. finetii. CONCLUSIONS: These markers will be useful for examining genetic diversity, polyploidy, and mating system in populations of T. smithii and for guiding study on the evolution of speciation in Thalictrum. |
format | Online Article Text |
id | pubmed-6110242 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-61102422018-09-13 Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae) Du, Bin‐Bin Zhan, Ya Li, Jiao‐Kun Chen, Ying‐Zhuo Tang, Lu‐Lu Appl Plant Sci Primer Notes PREMISE OF THE STUDY: Microsatellite primers were developed for the gynodioecious Chinese endemic Thalictrum smithii (Ranunculaceae). METHODS AND RESULTS: Thirty‐nine microsatellite primers were developed using the Fast Isolation by AFLP of Sequences COntaining repeats (FIASCO) method. Thirteen microsatellite loci were found to be highly polymorphic after screening 114 specimens (60 hermaphrodite and 54 female) from three T. smithii populations. The number of alleles per locus ranged from three to 13, and the levels of observed and expected heterozygosity per locus ranged from 0.000 to 1.000 and from 0.204 to 0.834, respectively. Twenty‐six of these primers were polymorphic in T. petaloideum and T. finetii. CONCLUSIONS: These markers will be useful for examining genetic diversity, polyploidy, and mating system in populations of T. smithii and for guiding study on the evolution of speciation in Thalictrum. John Wiley and Sons Inc. 2018-08-22 /pmc/articles/PMC6110242/ /pubmed/30214839 http://dx.doi.org/10.1002/aps3.1176 Text en © 2018 Du et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Primer Notes Du, Bin‐Bin Zhan, Ya Li, Jiao‐Kun Chen, Ying‐Zhuo Tang, Lu‐Lu Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae) |
title | Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae) |
title_full | Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae) |
title_fullStr | Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae) |
title_full_unstemmed | Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae) |
title_short | Development and characterization of microsatellite loci for the endemic Thalictrum smithii (Ranunculaceae) |
title_sort | development and characterization of microsatellite loci for the endemic thalictrum smithii (ranunculaceae) |
topic | Primer Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6110242/ https://www.ncbi.nlm.nih.gov/pubmed/30214839 http://dx.doi.org/10.1002/aps3.1176 |
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