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Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species
PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to study population structure and mating patterns of the monocarpic herb Moricandia moricandioides (Brassicaceae). METHODS AND RESULTS: Illumina MiSeq sequencing was used to develop a panel of 15 polymorphic microsatellite marke...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6110244/ https://www.ncbi.nlm.nih.gov/pubmed/30214835 http://dx.doi.org/10.1002/aps3.1172 |
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author | Cuenot, Yves Gómez, José M. González‐Megias, Adela Pannell, John R. Torices, Rubén |
author_facet | Cuenot, Yves Gómez, José M. González‐Megias, Adela Pannell, John R. Torices, Rubén |
author_sort | Cuenot, Yves |
collection | PubMed |
description | PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to study population structure and mating patterns of the monocarpic herb Moricandia moricandioides (Brassicaceae). METHODS AND RESULTS: Illumina MiSeq sequencing was used to develop a panel of 15 polymorphic microsatellite markers that were tested across 77 individuals from three populations on the Iberian Peninsula. All markers were polymorphic in at least two studied populations, and the number of alleles ranged from one to 11 per locus. The levels of observed and expected heterozygosity ranged from 0.000 to 1.000 and from 0.153 to 0.865, respectively. Nine and 11 loci were successfully amplified in the congeneric species M. arvensis and M. foetida, respectively. CONCLUSIONS: The 15 microsatellite markers will be useful for population genetic studies of the genus Moricandia. These markers will serve as a useful tool for exploring population structure and mating patterns of M. moricandioides. |
format | Online Article Text |
id | pubmed-6110244 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-61102442018-09-13 Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species Cuenot, Yves Gómez, José M. González‐Megias, Adela Pannell, John R. Torices, Rubén Appl Plant Sci Primer Notes PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to study population structure and mating patterns of the monocarpic herb Moricandia moricandioides (Brassicaceae). METHODS AND RESULTS: Illumina MiSeq sequencing was used to develop a panel of 15 polymorphic microsatellite markers that were tested across 77 individuals from three populations on the Iberian Peninsula. All markers were polymorphic in at least two studied populations, and the number of alleles ranged from one to 11 per locus. The levels of observed and expected heterozygosity ranged from 0.000 to 1.000 and from 0.153 to 0.865, respectively. Nine and 11 loci were successfully amplified in the congeneric species M. arvensis and M. foetida, respectively. CONCLUSIONS: The 15 microsatellite markers will be useful for population genetic studies of the genus Moricandia. These markers will serve as a useful tool for exploring population structure and mating patterns of M. moricandioides. John Wiley and Sons Inc. 2018-08-21 /pmc/articles/PMC6110244/ /pubmed/30214835 http://dx.doi.org/10.1002/aps3.1172 Text en © 2018 Cuenot et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Primer Notes Cuenot, Yves Gómez, José M. González‐Megias, Adela Pannell, John R. Torices, Rubén Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species |
title | Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species |
title_full | Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species |
title_fullStr | Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species |
title_full_unstemmed | Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species |
title_short | Characterization of microsatellite markers for Moricandia moricandioides (Brassicaceae) and related species |
title_sort | characterization of microsatellite markers for moricandia moricandioides (brassicaceae) and related species |
topic | Primer Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6110244/ https://www.ncbi.nlm.nih.gov/pubmed/30214835 http://dx.doi.org/10.1002/aps3.1172 |
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