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Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing

Primula chungensis is a species with considerable floral and mating-system variation, including distylous (outcrossing), homostylous (selfing) and mixed populations that contain both outcrossing and selfing forms. We isolated 24 microsatellite markers from P. chungensis using Illumina MiSeq sequenci...

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Detalles Bibliográficos
Autores principales: Zhou, Wei, Li, Haidong, Wu, Zhikun, Barrett, Spencer C.H., Li, Dezhu, Wang, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: KeAi Publishing 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6112135/
https://www.ncbi.nlm.nih.gov/pubmed/30159452
http://dx.doi.org/10.1016/j.pld.2015.12.002
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author Zhou, Wei
Li, Haidong
Wu, Zhikun
Barrett, Spencer C.H.
Li, Dezhu
Wang, Hong
author_facet Zhou, Wei
Li, Haidong
Wu, Zhikun
Barrett, Spencer C.H.
Li, Dezhu
Wang, Hong
author_sort Zhou, Wei
collection PubMed
description Primula chungensis is a species with considerable floral and mating-system variation, including distylous (outcrossing), homostylous (selfing) and mixed populations that contain both outcrossing and selfing forms. We isolated 24 microsatellite markers from P. chungensis using Illumina MiSeq sequencing. Polymorphism and genetic diversity were then measured based on a sample of 24 individuals from a natural population in southern Tibet. All loci were polymorphic with the number of alleles per locus ranging from 2 to 4. The observed and expected heterozygosity ranged from 0 to 1 and 0.219 to 0.708, respectively. The microsatellite markers we have identified will serve as valuable tools for the investigation of the population genetic structure and phylogeography of P. chungensis and will inform models of the evolutionary history of mating systems in the species.
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spelling pubmed-61121352018-08-29 Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing Zhou, Wei Li, Haidong Wu, Zhikun Barrett, Spencer C.H. Li, Dezhu Wang, Hong Plant Divers Article Primula chungensis is a species with considerable floral and mating-system variation, including distylous (outcrossing), homostylous (selfing) and mixed populations that contain both outcrossing and selfing forms. We isolated 24 microsatellite markers from P. chungensis using Illumina MiSeq sequencing. Polymorphism and genetic diversity were then measured based on a sample of 24 individuals from a natural population in southern Tibet. All loci were polymorphic with the number of alleles per locus ranging from 2 to 4. The observed and expected heterozygosity ranged from 0 to 1 and 0.219 to 0.708, respectively. The microsatellite markers we have identified will serve as valuable tools for the investigation of the population genetic structure and phylogeography of P. chungensis and will inform models of the evolutionary history of mating systems in the species. KeAi Publishing 2016-05-24 /pmc/articles/PMC6112135/ /pubmed/30159452 http://dx.doi.org/10.1016/j.pld.2015.12.002 Text en Copyright © 2016 Kunming Institute of Botany, Chinese Academy of Sciences. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Zhou, Wei
Li, Haidong
Wu, Zhikun
Barrett, Spencer C.H.
Li, Dezhu
Wang, Hong
Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing
title Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing
title_full Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing
title_fullStr Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing
title_full_unstemmed Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing
title_short Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing
title_sort characterization of 24 microsatellite markers in primula chungensis (primulaceae), a distylous–homostylous species, using miseq sequencing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6112135/
https://www.ncbi.nlm.nih.gov/pubmed/30159452
http://dx.doi.org/10.1016/j.pld.2015.12.002
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