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ggsashimi: Sashimi plot revised for browser- and annotation-independent splicing visualization

We present ggsashimi, a command-line tool for the visualization of splicing events across multiple samples. Given a specified genomic region, ggsashimi creates sashimi plots for individual RNA-seq experiments as well as aggregated plots for groups of experiments, a feature unique to this software. C...

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Detalles Bibliográficos
Autores principales: Garrido-Martín, Diego, Palumbo, Emilio, Guigó, Roderic, Breschi, Alessandra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6114895/
https://www.ncbi.nlm.nih.gov/pubmed/30118475
http://dx.doi.org/10.1371/journal.pcbi.1006360