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Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population

Vitiligo is a skin disease that affects 1% of the population worldwide. Both environmental and genetic factors contribute to the risk of vitiligo. GZMB encodes the enzyme Granzyme B, which plays an important role in cytotoxic T cell-induced apoptosis, and it has been considered one of the candidate...

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Autores principales: Xu, Meifeng, Liu, Yan, Liu, Yale, Li, Xiaoli, Chen, Gang, Dong, Wei, Xiao, Shengxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6115438/
https://www.ncbi.nlm.nih.gov/pubmed/30158536
http://dx.doi.org/10.1038/s41598-018-31233-8
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author Xu, Meifeng
Liu, Yan
Liu, Yale
Li, Xiaoli
Chen, Gang
Dong, Wei
Xiao, Shengxiang
author_facet Xu, Meifeng
Liu, Yan
Liu, Yale
Li, Xiaoli
Chen, Gang
Dong, Wei
Xiao, Shengxiang
author_sort Xu, Meifeng
collection PubMed
description Vitiligo is a skin disease that affects 1% of the population worldwide. Both environmental and genetic factors contribute to the risk of vitiligo. GZMB encodes the enzyme Granzyme B, which plays an important role in cytotoxic T cell-induced apoptosis, and it has been considered one of the candidate genes for vitiligo because of its connections with human immune system. Overall, 3,120 study subjects with Chinese Han ancestry were recruited, and 15 pre-selected SNPs of GZMB were genotyped. Genetic association analyses were performed to evaluate the genetic risk of these SNPs to vitiligo. Further bioinformatic analyses were conducted to examine the potential biological function of targeted SNPs. The SNP rs8192917, a non-synonymous coding SNP, was identified to be significantly associated with the disease status of vitiligo, with OR = 1.39 and P = 1.92 × 10(−8). Differences in the association signal can be observed in the stratification analyses of multiple clinical variables. Our positive results provide additional supportive evidence that GZMB gene is an important locus for vitiligo in Han Chinese population.
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spelling pubmed-61154382018-09-04 Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population Xu, Meifeng Liu, Yan Liu, Yale Li, Xiaoli Chen, Gang Dong, Wei Xiao, Shengxiang Sci Rep Article Vitiligo is a skin disease that affects 1% of the population worldwide. Both environmental and genetic factors contribute to the risk of vitiligo. GZMB encodes the enzyme Granzyme B, which plays an important role in cytotoxic T cell-induced apoptosis, and it has been considered one of the candidate genes for vitiligo because of its connections with human immune system. Overall, 3,120 study subjects with Chinese Han ancestry were recruited, and 15 pre-selected SNPs of GZMB were genotyped. Genetic association analyses were performed to evaluate the genetic risk of these SNPs to vitiligo. Further bioinformatic analyses were conducted to examine the potential biological function of targeted SNPs. The SNP rs8192917, a non-synonymous coding SNP, was identified to be significantly associated with the disease status of vitiligo, with OR = 1.39 and P = 1.92 × 10(−8). Differences in the association signal can be observed in the stratification analyses of multiple clinical variables. Our positive results provide additional supportive evidence that GZMB gene is an important locus for vitiligo in Han Chinese population. Nature Publishing Group UK 2018-08-29 /pmc/articles/PMC6115438/ /pubmed/30158536 http://dx.doi.org/10.1038/s41598-018-31233-8 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Xu, Meifeng
Liu, Yan
Liu, Yale
Li, Xiaoli
Chen, Gang
Dong, Wei
Xiao, Shengxiang
Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population
title Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population
title_full Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population
title_fullStr Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population
title_full_unstemmed Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population
title_short Genetic polymorphisms of GZMB and vitiligo: A genetic association study based on Chinese Han population
title_sort genetic polymorphisms of gzmb and vitiligo: a genetic association study based on chinese han population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6115438/
https://www.ncbi.nlm.nih.gov/pubmed/30158536
http://dx.doi.org/10.1038/s41598-018-31233-8
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