Cargando…

Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study

The growing cancer incidence and mortality worldwide claims for the development of novel diagnostic strategies. In this study we aimed to explore the potential of an innovative methodology, based on a needle trap microextraction (NTME), combined with gas chromatography-mass spectrometry (GC-MS), as...

Descripción completa

Detalles Bibliográficos
Autores principales: Porto-Figueira, Priscilla, Pereira, Jorge, Miekisch, Wolfram, Câmara, José S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6117359/
https://www.ncbi.nlm.nih.gov/pubmed/30166567
http://dx.doi.org/10.1038/s41598-018-31380-y
_version_ 1783351742038016000
author Porto-Figueira, Priscilla
Pereira, Jorge
Miekisch, Wolfram
Câmara, José S.
author_facet Porto-Figueira, Priscilla
Pereira, Jorge
Miekisch, Wolfram
Câmara, José S.
author_sort Porto-Figueira, Priscilla
collection PubMed
description The growing cancer incidence and mortality worldwide claims for the development of novel diagnostic strategies. In this study we aimed to explore the potential of an innovative methodology, based on a needle trap microextraction (NTME), combined with gas chromatography-mass spectrometry (GC-MS), as new approach to isolate and profile urinary volatile organic metabolites (VOMs) from lung cancer (LC) patients and healthy individuals (CTRL). In this context, different experimental parameters with influence of NTME extraction efficiency including, temperature, equilibration time, headspace volume, ionic strength, pH, effects of sample volume and stirring, were investigated and optimized. For the DVB/CarX/Car1000 needle trap device (NTD), the best results were obtained using 40 mL headspace of a 4-mL acidified (pH = 2) urine sample with 20% NaCl and an extraction temperature of 50 °C for 40 min of equilibration time. The stability of the isolated VOMs was investigated up to 72 h after extraction. From the VOMs identified, belonging namely to ketones, sulphur and benzene derivatives, 98 presented a frequency of occurrence above 90%. Data were processed by discriminant analysis, retrieving differentiated clusters for LC and CTRL groups. As far we are aware, this is the first study using NTME/GC-MS to establish urinary volatomic profiles. Preliminary results are very promising, as broad and comprehensive volatile profiles were obtained. Moreover, the extended storage stability of the NTD devices opens new opportunities for sampling other matrices in a wide range of applications.
format Online
Article
Text
id pubmed-6117359
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-61173592018-09-05 Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study Porto-Figueira, Priscilla Pereira, Jorge Miekisch, Wolfram Câmara, José S. Sci Rep Article The growing cancer incidence and mortality worldwide claims for the development of novel diagnostic strategies. In this study we aimed to explore the potential of an innovative methodology, based on a needle trap microextraction (NTME), combined with gas chromatography-mass spectrometry (GC-MS), as new approach to isolate and profile urinary volatile organic metabolites (VOMs) from lung cancer (LC) patients and healthy individuals (CTRL). In this context, different experimental parameters with influence of NTME extraction efficiency including, temperature, equilibration time, headspace volume, ionic strength, pH, effects of sample volume and stirring, were investigated and optimized. For the DVB/CarX/Car1000 needle trap device (NTD), the best results were obtained using 40 mL headspace of a 4-mL acidified (pH = 2) urine sample with 20% NaCl and an extraction temperature of 50 °C for 40 min of equilibration time. The stability of the isolated VOMs was investigated up to 72 h after extraction. From the VOMs identified, belonging namely to ketones, sulphur and benzene derivatives, 98 presented a frequency of occurrence above 90%. Data were processed by discriminant analysis, retrieving differentiated clusters for LC and CTRL groups. As far we are aware, this is the first study using NTME/GC-MS to establish urinary volatomic profiles. Preliminary results are very promising, as broad and comprehensive volatile profiles were obtained. Moreover, the extended storage stability of the NTD devices opens new opportunities for sampling other matrices in a wide range of applications. Nature Publishing Group UK 2018-08-30 /pmc/articles/PMC6117359/ /pubmed/30166567 http://dx.doi.org/10.1038/s41598-018-31380-y Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Porto-Figueira, Priscilla
Pereira, Jorge
Miekisch, Wolfram
Câmara, José S.
Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study
title Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study
title_full Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study
title_fullStr Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study
title_full_unstemmed Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study
title_short Exploring the potential of NTME/GC-MS, in the establishment of urinary volatomic profiles. Lung cancer patients as case study
title_sort exploring the potential of ntme/gc-ms, in the establishment of urinary volatomic profiles. lung cancer patients as case study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6117359/
https://www.ncbi.nlm.nih.gov/pubmed/30166567
http://dx.doi.org/10.1038/s41598-018-31380-y
work_keys_str_mv AT portofigueirapriscilla exploringthepotentialofntmegcmsintheestablishmentofurinaryvolatomicprofileslungcancerpatientsascasestudy
AT pereirajorge exploringthepotentialofntmegcmsintheestablishmentofurinaryvolatomicprofileslungcancerpatientsascasestudy
AT miekischwolfram exploringthepotentialofntmegcmsintheestablishmentofurinaryvolatomicprofileslungcancerpatientsascasestudy
AT camarajoses exploringthepotentialofntmegcmsintheestablishmentofurinaryvolatomicprofileslungcancerpatientsascasestudy