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NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa
The TonB protein plays an essential role in the energy transduction system to drive active transport across the outer membrane (OM) using the proton-motive force of the cytoplasmic membrane of Gram-negative bacteria. The C-terminal domain (CTD) of TonB protein is known to interact with the conserved...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6118199/ https://www.ncbi.nlm.nih.gov/pubmed/30186676 http://dx.doi.org/10.7717/peerj.5412 |
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author | Oeemig, Jesper S. Ollila, O.H. Samuli Iwaï, Hideo |
author_facet | Oeemig, Jesper S. Ollila, O.H. Samuli Iwaï, Hideo |
author_sort | Oeemig, Jesper S. |
collection | PubMed |
description | The TonB protein plays an essential role in the energy transduction system to drive active transport across the outer membrane (OM) using the proton-motive force of the cytoplasmic membrane of Gram-negative bacteria. The C-terminal domain (CTD) of TonB protein is known to interact with the conserved TonB box motif of TonB-dependent OM transporters, which likely induces structural changes in the OM transporters. Several distinct conformations of differently dissected CTDs of Escherichia coli TonB have been previously reported. Here we determined the solution NMR structure of a 96-residue fragment of Pseudomonas aeruginosa TonB (PaTonB-96). The structure shows a monomeric structure with the flexible C-terminal region (residues 338–342), different from the NMR structure of E. coli TonB (EcTonB-137). The extended and flexible C-terminal residues are confirmed by (15)N relaxation analysis and molecular dynamics simulation. We created models for the PaTonB-96/TonB box interaction and propose that the internal fluctuations of PaTonB-96 makes it more accessible for the interactions with the TonB box and possibly plays a role in disrupting the plug domain of the TonB-dependent OM transporters. |
format | Online Article Text |
id | pubmed-6118199 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-61181992018-09-05 NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa Oeemig, Jesper S. Ollila, O.H. Samuli Iwaï, Hideo PeerJ Biochemistry The TonB protein plays an essential role in the energy transduction system to drive active transport across the outer membrane (OM) using the proton-motive force of the cytoplasmic membrane of Gram-negative bacteria. The C-terminal domain (CTD) of TonB protein is known to interact with the conserved TonB box motif of TonB-dependent OM transporters, which likely induces structural changes in the OM transporters. Several distinct conformations of differently dissected CTDs of Escherichia coli TonB have been previously reported. Here we determined the solution NMR structure of a 96-residue fragment of Pseudomonas aeruginosa TonB (PaTonB-96). The structure shows a monomeric structure with the flexible C-terminal region (residues 338–342), different from the NMR structure of E. coli TonB (EcTonB-137). The extended and flexible C-terminal residues are confirmed by (15)N relaxation analysis and molecular dynamics simulation. We created models for the PaTonB-96/TonB box interaction and propose that the internal fluctuations of PaTonB-96 makes it more accessible for the interactions with the TonB box and possibly plays a role in disrupting the plug domain of the TonB-dependent OM transporters. PeerJ Inc. 2018-08-27 /pmc/articles/PMC6118199/ /pubmed/30186676 http://dx.doi.org/10.7717/peerj.5412 Text en © 2018 Oeemig et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Biochemistry Oeemig, Jesper S. Ollila, O.H. Samuli Iwaï, Hideo NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa |
title | NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa |
title_full | NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa |
title_fullStr | NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa |
title_full_unstemmed | NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa |
title_short | NMR structure of the C-terminal domain of TonB protein from Pseudomonas aeruginosa |
title_sort | nmr structure of the c-terminal domain of tonb protein from pseudomonas aeruginosa |
topic | Biochemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6118199/ https://www.ncbi.nlm.nih.gov/pubmed/30186676 http://dx.doi.org/10.7717/peerj.5412 |
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