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Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings
Translation of radiomics into the clinic may require a more comprehensive understanding of the underlying morphologic tissue characteristics they reflect. In the context of prostate cancer (PCa), some studies have correlated gross histological measurements of gland lumen, epithelium, and nuclei with...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6118356/ https://www.ncbi.nlm.nih.gov/pubmed/30169514 http://dx.doi.org/10.1371/journal.pone.0200730 |
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author | Penzias, Gregory Singanamalli, Asha Elliott, Robin Gollamudi, Jay Shih, Natalie Feldman, Michael Stricker, Phillip D. Delprado, Warick Tiwari, Sarita Böhm, Maret Haynes, Anne-Maree Ponsky, Lee Fu, Pingfu Tiwari, Pallavi Viswanath, Satish Madabhushi, Anant |
author_facet | Penzias, Gregory Singanamalli, Asha Elliott, Robin Gollamudi, Jay Shih, Natalie Feldman, Michael Stricker, Phillip D. Delprado, Warick Tiwari, Sarita Böhm, Maret Haynes, Anne-Maree Ponsky, Lee Fu, Pingfu Tiwari, Pallavi Viswanath, Satish Madabhushi, Anant |
author_sort | Penzias, Gregory |
collection | PubMed |
description | Translation of radiomics into the clinic may require a more comprehensive understanding of the underlying morphologic tissue characteristics they reflect. In the context of prostate cancer (PCa), some studies have correlated gross histological measurements of gland lumen, epithelium, and nuclei with disease appearance on MRI. Quantitative histomorphometry (QH), like radiomics for radiologic images, is the computer based extraction of features for describing tumor morphology on digitized tissue images. In this work, we attempt to establish the histomorphometric basis for radiomic features for prostate cancer by (1) identifying the radiomic features from T2w MRI most discriminating of low vs. intermediate/high Gleason score, (2) identifying QH features correlated with the most discriminating radiomic features previously identified, and (3) evaluating the discriminative ability of QH features found to be correlated with spatially co-localized radiomic features. On a cohort of 36 patients (23 for training, 13 for validation), Gabor texture features were identified as being most predictive of Gleason grade on MRI (AUC of 0.69) and gland lumen shape features were identified as the most predictive QH features (AUC = 0.75). Our results suggest that the PCa grade discriminability of Gabor features is a consequence of variations in gland shape and morphology at the tissue level. |
format | Online Article Text |
id | pubmed-6118356 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-61183562018-09-16 Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings Penzias, Gregory Singanamalli, Asha Elliott, Robin Gollamudi, Jay Shih, Natalie Feldman, Michael Stricker, Phillip D. Delprado, Warick Tiwari, Sarita Böhm, Maret Haynes, Anne-Maree Ponsky, Lee Fu, Pingfu Tiwari, Pallavi Viswanath, Satish Madabhushi, Anant PLoS One Research Article Translation of radiomics into the clinic may require a more comprehensive understanding of the underlying morphologic tissue characteristics they reflect. In the context of prostate cancer (PCa), some studies have correlated gross histological measurements of gland lumen, epithelium, and nuclei with disease appearance on MRI. Quantitative histomorphometry (QH), like radiomics for radiologic images, is the computer based extraction of features for describing tumor morphology on digitized tissue images. In this work, we attempt to establish the histomorphometric basis for radiomic features for prostate cancer by (1) identifying the radiomic features from T2w MRI most discriminating of low vs. intermediate/high Gleason score, (2) identifying QH features correlated with the most discriminating radiomic features previously identified, and (3) evaluating the discriminative ability of QH features found to be correlated with spatially co-localized radiomic features. On a cohort of 36 patients (23 for training, 13 for validation), Gabor texture features were identified as being most predictive of Gleason grade on MRI (AUC of 0.69) and gland lumen shape features were identified as the most predictive QH features (AUC = 0.75). Our results suggest that the PCa grade discriminability of Gabor features is a consequence of variations in gland shape and morphology at the tissue level. Public Library of Science 2018-08-31 /pmc/articles/PMC6118356/ /pubmed/30169514 http://dx.doi.org/10.1371/journal.pone.0200730 Text en © 2018 Penzias et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Penzias, Gregory Singanamalli, Asha Elliott, Robin Gollamudi, Jay Shih, Natalie Feldman, Michael Stricker, Phillip D. Delprado, Warick Tiwari, Sarita Böhm, Maret Haynes, Anne-Maree Ponsky, Lee Fu, Pingfu Tiwari, Pallavi Viswanath, Satish Madabhushi, Anant Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings |
title | Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings |
title_full | Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings |
title_fullStr | Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings |
title_full_unstemmed | Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings |
title_short | Identifying the morphologic basis for radiomic features in distinguishing different Gleason grades of prostate cancer on MRI: Preliminary findings |
title_sort | identifying the morphologic basis for radiomic features in distinguishing different gleason grades of prostate cancer on mri: preliminary findings |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6118356/ https://www.ncbi.nlm.nih.gov/pubmed/30169514 http://dx.doi.org/10.1371/journal.pone.0200730 |
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