Cargando…

Coarse-Grained Simulations Using a Multipolar Force Field Model

This paper presents a coarse-grained molecular simulation for fullerenes based on a multipolar expansion method developed previously. The method is enabled by the construction of transferable united atoms potentials that approximate the full atomistic intermolecular interactions, as obtained from ab...

Descripción completa

Detalles Bibliográficos
Autores principales: Chiu, Shuo-Feng, Chao, Sheng D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120006/
https://www.ncbi.nlm.nih.gov/pubmed/30065228
http://dx.doi.org/10.3390/ma11081328
_version_ 1783352183225319424
author Chiu, Shuo-Feng
Chao, Sheng D.
author_facet Chiu, Shuo-Feng
Chao, Sheng D.
author_sort Chiu, Shuo-Feng
collection PubMed
description This paper presents a coarse-grained molecular simulation for fullerenes based on a multipolar expansion method developed previously. The method is enabled by the construction of transferable united atoms potentials that approximate the full atomistic intermolecular interactions, as obtained from ab initio electronic structure calculations supplemented by empirical force fields and experimental data, or any combination of the above. The resultant series contains controllable moment tensors that allow to estimate the errors, and approaches the all-atom intermolecular potential as the expansion order increases. We can compute the united atoms potentials very efficiently with a few interaction moment tensors, in order to implement a parallel algorithm on molecular interactions. Our simulations describe the mechanism for the condensation of fullerenes, and they produce excellent agreement with benchmark fully atomistic molecular dynamics simulations.
format Online
Article
Text
id pubmed-6120006
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-61200062018-09-05 Coarse-Grained Simulations Using a Multipolar Force Field Model Chiu, Shuo-Feng Chao, Sheng D. Materials (Basel) Article This paper presents a coarse-grained molecular simulation for fullerenes based on a multipolar expansion method developed previously. The method is enabled by the construction of transferable united atoms potentials that approximate the full atomistic intermolecular interactions, as obtained from ab initio electronic structure calculations supplemented by empirical force fields and experimental data, or any combination of the above. The resultant series contains controllable moment tensors that allow to estimate the errors, and approaches the all-atom intermolecular potential as the expansion order increases. We can compute the united atoms potentials very efficiently with a few interaction moment tensors, in order to implement a parallel algorithm on molecular interactions. Our simulations describe the mechanism for the condensation of fullerenes, and they produce excellent agreement with benchmark fully atomistic molecular dynamics simulations. MDPI 2018-07-31 /pmc/articles/PMC6120006/ /pubmed/30065228 http://dx.doi.org/10.3390/ma11081328 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chiu, Shuo-Feng
Chao, Sheng D.
Coarse-Grained Simulations Using a Multipolar Force Field Model
title Coarse-Grained Simulations Using a Multipolar Force Field Model
title_full Coarse-Grained Simulations Using a Multipolar Force Field Model
title_fullStr Coarse-Grained Simulations Using a Multipolar Force Field Model
title_full_unstemmed Coarse-Grained Simulations Using a Multipolar Force Field Model
title_short Coarse-Grained Simulations Using a Multipolar Force Field Model
title_sort coarse-grained simulations using a multipolar force field model
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120006/
https://www.ncbi.nlm.nih.gov/pubmed/30065228
http://dx.doi.org/10.3390/ma11081328
work_keys_str_mv AT chiushuofeng coarsegrainedsimulationsusingamultipolarforcefieldmodel
AT chaoshengd coarsegrainedsimulationsusingamultipolarforcefieldmodel