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Coarse-Grained Simulations Using a Multipolar Force Field Model
This paper presents a coarse-grained molecular simulation for fullerenes based on a multipolar expansion method developed previously. The method is enabled by the construction of transferable united atoms potentials that approximate the full atomistic intermolecular interactions, as obtained from ab...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120006/ https://www.ncbi.nlm.nih.gov/pubmed/30065228 http://dx.doi.org/10.3390/ma11081328 |
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author | Chiu, Shuo-Feng Chao, Sheng D. |
author_facet | Chiu, Shuo-Feng Chao, Sheng D. |
author_sort | Chiu, Shuo-Feng |
collection | PubMed |
description | This paper presents a coarse-grained molecular simulation for fullerenes based on a multipolar expansion method developed previously. The method is enabled by the construction of transferable united atoms potentials that approximate the full atomistic intermolecular interactions, as obtained from ab initio electronic structure calculations supplemented by empirical force fields and experimental data, or any combination of the above. The resultant series contains controllable moment tensors that allow to estimate the errors, and approaches the all-atom intermolecular potential as the expansion order increases. We can compute the united atoms potentials very efficiently with a few interaction moment tensors, in order to implement a parallel algorithm on molecular interactions. Our simulations describe the mechanism for the condensation of fullerenes, and they produce excellent agreement with benchmark fully atomistic molecular dynamics simulations. |
format | Online Article Text |
id | pubmed-6120006 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-61200062018-09-05 Coarse-Grained Simulations Using a Multipolar Force Field Model Chiu, Shuo-Feng Chao, Sheng D. Materials (Basel) Article This paper presents a coarse-grained molecular simulation for fullerenes based on a multipolar expansion method developed previously. The method is enabled by the construction of transferable united atoms potentials that approximate the full atomistic intermolecular interactions, as obtained from ab initio electronic structure calculations supplemented by empirical force fields and experimental data, or any combination of the above. The resultant series contains controllable moment tensors that allow to estimate the errors, and approaches the all-atom intermolecular potential as the expansion order increases. We can compute the united atoms potentials very efficiently with a few interaction moment tensors, in order to implement a parallel algorithm on molecular interactions. Our simulations describe the mechanism for the condensation of fullerenes, and they produce excellent agreement with benchmark fully atomistic molecular dynamics simulations. MDPI 2018-07-31 /pmc/articles/PMC6120006/ /pubmed/30065228 http://dx.doi.org/10.3390/ma11081328 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chiu, Shuo-Feng Chao, Sheng D. Coarse-Grained Simulations Using a Multipolar Force Field Model |
title | Coarse-Grained Simulations Using a Multipolar Force Field Model |
title_full | Coarse-Grained Simulations Using a Multipolar Force Field Model |
title_fullStr | Coarse-Grained Simulations Using a Multipolar Force Field Model |
title_full_unstemmed | Coarse-Grained Simulations Using a Multipolar Force Field Model |
title_short | Coarse-Grained Simulations Using a Multipolar Force Field Model |
title_sort | coarse-grained simulations using a multipolar force field model |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120006/ https://www.ncbi.nlm.nih.gov/pubmed/30065228 http://dx.doi.org/10.3390/ma11081328 |
work_keys_str_mv | AT chiushuofeng coarsegrainedsimulationsusingamultipolarforcefieldmodel AT chaoshengd coarsegrainedsimulationsusingamultipolarforcefieldmodel |