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Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data

Substantial efforts have been made to identify crop types by region, but few studies have been able to classify crops in early season, particularly in regions with heterogeneous cropping patterns. This is because image time series with both high spatial and temporal resolution contain a number of ir...

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Autores principales: Hao, Pengyu, Tang, Huajun, Chen, Zhongxin, Liu, Zhengjia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120442/
https://www.ncbi.nlm.nih.gov/pubmed/30186678
http://dx.doi.org/10.7717/peerj.5431
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author Hao, Pengyu
Tang, Huajun
Chen, Zhongxin
Liu, Zhengjia
author_facet Hao, Pengyu
Tang, Huajun
Chen, Zhongxin
Liu, Zhengjia
author_sort Hao, Pengyu
collection PubMed
description Substantial efforts have been made to identify crop types by region, but few studies have been able to classify crops in early season, particularly in regions with heterogeneous cropping patterns. This is because image time series with both high spatial and temporal resolution contain a number of irregular time series, which cannot be identified by most existing classifiers. In this study, we firstly proposed an improved artificial immune network (IAIN), and tried to identify major crops in Hengshui, China at early season using IAIN classifier and short image time series. A time series of 15-day composited images was generated from 10 m spatial resolution Sentinel-1 and Sentinel-2 data. Near-infrared (NIR) band and normalized difference vegetation index (NDVI) were selected as optimal bands by pair-wise Jeffries–Matusita distances and Gini importance scores calculated from the random forest algorithm. When using IAIN to identify irregular time series, overall accuracy of winter wheat and summer crops were 99% and 98.55%, respectively. We then used the IAIN classifier and NIR and NDVI time series to identify major crops in the study region. Results showed that winter wheat could be identified 20 days before harvest, as both the producer’s accuracy (PA) and user’s accuracy (UA) values were higher than 95% when an April 1–May 15 time series was used. The PA and UA of cotton and spring maize were higher than 95% with image time series longer than April 1–August 15. As spring maize and cotton mature in late August and September–October, respectively, these two crops can be accurately mapped 4–6 weeks before harvest. In addition, summer maize could be accurately identified after August 15, more than one month before harvest. This study shows the potential of IAIN classifier for dealing with irregular time series and Sentinel-1 and Sentinel-2 image time series at early-season crop type mapping, which is useful for crop management.
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spelling pubmed-61204422018-09-05 Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data Hao, Pengyu Tang, Huajun Chen, Zhongxin Liu, Zhengjia PeerJ Spatial and Geographic Information Science Substantial efforts have been made to identify crop types by region, but few studies have been able to classify crops in early season, particularly in regions with heterogeneous cropping patterns. This is because image time series with both high spatial and temporal resolution contain a number of irregular time series, which cannot be identified by most existing classifiers. In this study, we firstly proposed an improved artificial immune network (IAIN), and tried to identify major crops in Hengshui, China at early season using IAIN classifier and short image time series. A time series of 15-day composited images was generated from 10 m spatial resolution Sentinel-1 and Sentinel-2 data. Near-infrared (NIR) band and normalized difference vegetation index (NDVI) were selected as optimal bands by pair-wise Jeffries–Matusita distances and Gini importance scores calculated from the random forest algorithm. When using IAIN to identify irregular time series, overall accuracy of winter wheat and summer crops were 99% and 98.55%, respectively. We then used the IAIN classifier and NIR and NDVI time series to identify major crops in the study region. Results showed that winter wheat could be identified 20 days before harvest, as both the producer’s accuracy (PA) and user’s accuracy (UA) values were higher than 95% when an April 1–May 15 time series was used. The PA and UA of cotton and spring maize were higher than 95% with image time series longer than April 1–August 15. As spring maize and cotton mature in late August and September–October, respectively, these two crops can be accurately mapped 4–6 weeks before harvest. In addition, summer maize could be accurately identified after August 15, more than one month before harvest. This study shows the potential of IAIN classifier for dealing with irregular time series and Sentinel-1 and Sentinel-2 image time series at early-season crop type mapping, which is useful for crop management. PeerJ Inc. 2018-08-31 /pmc/articles/PMC6120442/ /pubmed/30186678 http://dx.doi.org/10.7717/peerj.5431 Text en © 2018 Hao et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Spatial and Geographic Information Science
Hao, Pengyu
Tang, Huajun
Chen, Zhongxin
Liu, Zhengjia
Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data
title Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data
title_full Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data
title_fullStr Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data
title_full_unstemmed Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data
title_short Early-season crop mapping using improved artificial immune network (IAIN) and Sentinel data
title_sort early-season crop mapping using improved artificial immune network (iain) and sentinel data
topic Spatial and Geographic Information Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120442/
https://www.ncbi.nlm.nih.gov/pubmed/30186678
http://dx.doi.org/10.7717/peerj.5431
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AT chenzhongxin earlyseasoncropmappingusingimprovedartificialimmunenetworkiainandsentineldata
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