BrownieAligner: accurate alignment of Illumina sequencing data to de Bruijn graphs

BACKGROUND: Aligning short reads to a reference genome is an important task in many genome analysis pipelines. This task is computationally more complex when the reference genome is provided in the form of a de Bruijn graph instead of a linear sequence string. RESULTS: We present a branch and bound...

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Detalles Bibliográficos
Autores principales: Heydari, Mahdi, Miclotte, Giles, Van de Peer, Yves, Fostier, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122196/
https://www.ncbi.nlm.nih.gov/pubmed/30180801
http://dx.doi.org/10.1186/s12859-018-2319-7

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122196/
https://www.ncbi.nlm.nih.gov/pubmed/30180801
http://dx.doi.org/10.1186/s12859-018-2319-7

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