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BrownieAligner: accurate alignment of Illumina sequencing data to de Bruijn graphs
BACKGROUND: Aligning short reads to a reference genome is an important task in many genome analysis pipelines. This task is computationally more complex when the reference genome is provided in the form of a de Bruijn graph instead of a linear sequence string. RESULTS: We present a branch and bound...
Autores principales: | Heydari, Mahdi, Miclotte, Giles, Van de Peer, Yves, Fostier, Jan |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122196/ https://www.ncbi.nlm.nih.gov/pubmed/30180801 http://dx.doi.org/10.1186/s12859-018-2319-7 |
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