Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses

Loop-mediated isothermal amplification (LAMP) and recombinase polymerase amplification (RPA) are two rapid isothermal amplification methods for detecting three common fungal root pathogens of cool-season turfgrass: Gaeumannomyces avenae, Magnaporthiopsis poae and Ophiosphaerella korrae, “Detection o...

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Autores principales: Karakkat, Brijesh B., Hockemeyer, Kurt, Franchett, Margot, Olson, Megan, Mullenberg, Cortney, Koch, Paul L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Immunology and Microbiology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122334/
https://www.ncbi.nlm.nih.gov/pubmed/30186897
http://dx.doi.org/10.1016/j.dib.2018.08.021
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author Karakkat, Brijesh B.
Hockemeyer, Kurt
Franchett, Margot
Olson, Megan
Mullenberg, Cortney
Koch, Paul L.
author_facet Karakkat, Brijesh B.
Hockemeyer, Kurt
Franchett, Margot
Olson, Megan
Mullenberg, Cortney
Koch, Paul L.
author_sort Karakkat, Brijesh B.
collection PubMed
description Loop-mediated isothermal amplification (LAMP) and recombinase polymerase amplification (RPA) are two rapid isothermal amplification methods for detecting three common fungal root pathogens of cool-season turfgrass: Gaeumannomyces avenae, Magnaporthiopsis poae and Ophiosphaerella korrae, “Detection of root-infecting fungi on cool-season turfgrasses using loop-mediated isothermal amplification and recombinase polymerase amplification” (Karakkat et al., 2018) [1]. The data provided here describe the information for designing primers and probes for LAMP and RPA, how specific they are for each of the three fungi, and the evaluation of RPA on field samples.
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spelling pubmed-61223342018-09-05 Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses Karakkat, Brijesh B. Hockemeyer, Kurt Franchett, Margot Olson, Megan Mullenberg, Cortney Koch, Paul L. Data Brief Immunology and Microbiology Loop-mediated isothermal amplification (LAMP) and recombinase polymerase amplification (RPA) are two rapid isothermal amplification methods for detecting three common fungal root pathogens of cool-season turfgrass: Gaeumannomyces avenae, Magnaporthiopsis poae and Ophiosphaerella korrae, “Detection of root-infecting fungi on cool-season turfgrasses using loop-mediated isothermal amplification and recombinase polymerase amplification” (Karakkat et al., 2018) [1]. The data provided here describe the information for designing primers and probes for LAMP and RPA, how specific they are for each of the three fungi, and the evaluation of RPA on field samples. Elsevier 2018-08-17 /pmc/articles/PMC6122334/ /pubmed/30186897 http://dx.doi.org/10.1016/j.dib.2018.08.021 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Immunology and Microbiology
Karakkat, Brijesh B.
Hockemeyer, Kurt
Franchett, Margot
Olson, Megan
Mullenberg, Cortney
Koch, Paul L.
Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses
title Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses
title_full Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses
title_fullStr Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses
title_full_unstemmed Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses
title_short Data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses
title_sort data for designing two isothermal amplification assays for the detection of root-infecting fungi on cool-season turfgrasses
topic Immunology and Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122334/
https://www.ncbi.nlm.nih.gov/pubmed/30186897
http://dx.doi.org/10.1016/j.dib.2018.08.021
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