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Relationship between the Ki67 index and its area based approximation in breast cancer
BACKGROUND: The Ki67 Index has been extensively studied as a prognostic biomarker in breast cancer. However, its clinical adoption is largely hampered by the lack of a standardized method to assess Ki67 that limits inter-laboratory reproducibility. It is important to standardize the computation of t...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122570/ https://www.ncbi.nlm.nih.gov/pubmed/30176814 http://dx.doi.org/10.1186/s12885-018-4735-5 |
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author | Niazi, Muhammad Khalid Khan Senaras, Caglar Pennell, Michael Arole, Vidya Tozbikian, Gary Gurcan, Metin N. |
author_facet | Niazi, Muhammad Khalid Khan Senaras, Caglar Pennell, Michael Arole, Vidya Tozbikian, Gary Gurcan, Metin N. |
author_sort | Niazi, Muhammad Khalid Khan |
collection | PubMed |
description | BACKGROUND: The Ki67 Index has been extensively studied as a prognostic biomarker in breast cancer. However, its clinical adoption is largely hampered by the lack of a standardized method to assess Ki67 that limits inter-laboratory reproducibility. It is important to standardize the computation of the Ki67 Index before it can be effectively used in clincial practice. METHOD: In this study, we develop a systematic approach towards standardization of the Ki67 Index. We first create the ground truth consisting of tumor positive and tumor negative nuclei by registering adjacent breast tissue sections stained with Ki67 and H&E. The registration is followed by segmentation of positive and negative nuclei within tumor regions from Ki67 images. The true Ki67 Index is then approximated with a linear model of the area of positive to the total area of tumor nuclei. RESULTS: When tested on 75 images of Ki67 stained breast cancer biopsies, the proposed method resulted in an average root mean square error of 3.34. In comparison, an expert pathologist resulted in an average root mean square error of 9.98 and an existing automated approach produced an average root mean square error of 5.64. CONCLUSIONS: We show that it is possible to approximate the true Ki67 Index accurately without detecting individual nuclei and also statically demonstrate the weaknesses of commonly adopted approaches that use both tumor and non-tumor regions together while compensating for the latter with higher order approximations. |
format | Online Article Text |
id | pubmed-6122570 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-61225702018-09-05 Relationship between the Ki67 index and its area based approximation in breast cancer Niazi, Muhammad Khalid Khan Senaras, Caglar Pennell, Michael Arole, Vidya Tozbikian, Gary Gurcan, Metin N. BMC Cancer Research Article BACKGROUND: The Ki67 Index has been extensively studied as a prognostic biomarker in breast cancer. However, its clinical adoption is largely hampered by the lack of a standardized method to assess Ki67 that limits inter-laboratory reproducibility. It is important to standardize the computation of the Ki67 Index before it can be effectively used in clincial practice. METHOD: In this study, we develop a systematic approach towards standardization of the Ki67 Index. We first create the ground truth consisting of tumor positive and tumor negative nuclei by registering adjacent breast tissue sections stained with Ki67 and H&E. The registration is followed by segmentation of positive and negative nuclei within tumor regions from Ki67 images. The true Ki67 Index is then approximated with a linear model of the area of positive to the total area of tumor nuclei. RESULTS: When tested on 75 images of Ki67 stained breast cancer biopsies, the proposed method resulted in an average root mean square error of 3.34. In comparison, an expert pathologist resulted in an average root mean square error of 9.98 and an existing automated approach produced an average root mean square error of 5.64. CONCLUSIONS: We show that it is possible to approximate the true Ki67 Index accurately without detecting individual nuclei and also statically demonstrate the weaknesses of commonly adopted approaches that use both tumor and non-tumor regions together while compensating for the latter with higher order approximations. BioMed Central 2018-09-03 /pmc/articles/PMC6122570/ /pubmed/30176814 http://dx.doi.org/10.1186/s12885-018-4735-5 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Niazi, Muhammad Khalid Khan Senaras, Caglar Pennell, Michael Arole, Vidya Tozbikian, Gary Gurcan, Metin N. Relationship between the Ki67 index and its area based approximation in breast cancer |
title | Relationship between the Ki67 index and its area based approximation in breast cancer |
title_full | Relationship between the Ki67 index and its area based approximation in breast cancer |
title_fullStr | Relationship between the Ki67 index and its area based approximation in breast cancer |
title_full_unstemmed | Relationship between the Ki67 index and its area based approximation in breast cancer |
title_short | Relationship between the Ki67 index and its area based approximation in breast cancer |
title_sort | relationship between the ki67 index and its area based approximation in breast cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122570/ https://www.ncbi.nlm.nih.gov/pubmed/30176814 http://dx.doi.org/10.1186/s12885-018-4735-5 |
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