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CO(2) to succinic acid – Estimating the potential of biocatalytic routes

Microbial carbon dioxide assimilation and conversion to chemical platform molecules has the potential to be developed as economic, sustainable processes. The carbon dioxide assimilation can proceed by a variety of natural pathways and recently even synthetic CO(2) fixation routes have been designed....

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Detalles Bibliográficos
Autores principales: Liebal, Ulf W., Blank, Lars M., Ebert, Birgitta E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6127376/
https://www.ncbi.nlm.nih.gov/pubmed/30197864
http://dx.doi.org/10.1016/j.mec.2018.e00075
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author Liebal, Ulf W.
Blank, Lars M.
Ebert, Birgitta E.
author_facet Liebal, Ulf W.
Blank, Lars M.
Ebert, Birgitta E.
author_sort Liebal, Ulf W.
collection PubMed
description Microbial carbon dioxide assimilation and conversion to chemical platform molecules has the potential to be developed as economic, sustainable processes. The carbon dioxide assimilation can proceed by a variety of natural pathways and recently even synthetic CO(2) fixation routes have been designed. Early assessment of the performance of the different carbon fixation alternatives within biotechnological processes is desirable to evaluate their potential. Here we applied stoichiometric metabolic modeling based on physiological and process data to evaluate different process variants for the conversion of C1 carbon compounds to the industrial relevant platform chemical succinic acid. We computationally analyzed the performance of cyanobacteria, acetogens, methylotrophs, and synthetic CO(2) fixation pathways in Saccharomyces cerevisiae in terms of production rates, product yields, and the optimization potential. This analysis provided insight into the economic feasibility and allowed to estimate the future industrial applicability by estimating overall production costs. With reported, or estimated data of engineered or wild type strains, none of the simulated microbial succinate production processes showed a performance allowing competitive production. The main limiting factors were identified as gas and photon transfer and metabolic activities whereas metabolic network structure was not restricting. In simulations with optimized parameters most process alternatives reached economically interesting values, hence, represent promising alternatives to sugar-based fermentations.
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spelling pubmed-61273762018-09-07 CO(2) to succinic acid – Estimating the potential of biocatalytic routes Liebal, Ulf W. Blank, Lars M. Ebert, Birgitta E. Metab Eng Commun Article Microbial carbon dioxide assimilation and conversion to chemical platform molecules has the potential to be developed as economic, sustainable processes. The carbon dioxide assimilation can proceed by a variety of natural pathways and recently even synthetic CO(2) fixation routes have been designed. Early assessment of the performance of the different carbon fixation alternatives within biotechnological processes is desirable to evaluate their potential. Here we applied stoichiometric metabolic modeling based on physiological and process data to evaluate different process variants for the conversion of C1 carbon compounds to the industrial relevant platform chemical succinic acid. We computationally analyzed the performance of cyanobacteria, acetogens, methylotrophs, and synthetic CO(2) fixation pathways in Saccharomyces cerevisiae in terms of production rates, product yields, and the optimization potential. This analysis provided insight into the economic feasibility and allowed to estimate the future industrial applicability by estimating overall production costs. With reported, or estimated data of engineered or wild type strains, none of the simulated microbial succinate production processes showed a performance allowing competitive production. The main limiting factors were identified as gas and photon transfer and metabolic activities whereas metabolic network structure was not restricting. In simulations with optimized parameters most process alternatives reached economically interesting values, hence, represent promising alternatives to sugar-based fermentations. Elsevier 2018-06-28 /pmc/articles/PMC6127376/ /pubmed/30197864 http://dx.doi.org/10.1016/j.mec.2018.e00075 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Liebal, Ulf W.
Blank, Lars M.
Ebert, Birgitta E.
CO(2) to succinic acid – Estimating the potential of biocatalytic routes
title CO(2) to succinic acid – Estimating the potential of biocatalytic routes
title_full CO(2) to succinic acid – Estimating the potential of biocatalytic routes
title_fullStr CO(2) to succinic acid – Estimating the potential of biocatalytic routes
title_full_unstemmed CO(2) to succinic acid – Estimating the potential of biocatalytic routes
title_short CO(2) to succinic acid – Estimating the potential of biocatalytic routes
title_sort co(2) to succinic acid – estimating the potential of biocatalytic routes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6127376/
https://www.ncbi.nlm.nih.gov/pubmed/30197864
http://dx.doi.org/10.1016/j.mec.2018.e00075
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