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Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and...

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Autores principales: Advani, Jayshree, Sharma, Kusum, Verma, Renu, Chatterjee, Oishi, Solanki, Hitendra S., Sharma, Aman, Varma, Subhash, Modi, Manish, Ray, Pallab, Sharma, Megha, Dhillion, M.S., Pandey, Akhilesh, Gowda, Harsha, Prasad, T.S. Keshava
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6127979/
https://www.ncbi.nlm.nih.gov/pubmed/30197919
http://dx.doi.org/10.1016/j.dib.2018.08.048
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author Advani, Jayshree
Sharma, Kusum
Verma, Renu
Chatterjee, Oishi
Solanki, Hitendra S.
Sharma, Aman
Varma, Subhash
Modi, Manish
Ray, Pallab
Sharma, Megha
Dhillion, M.S.
Pandey, Akhilesh
Gowda, Harsha
Prasad, T.S. Keshava
author_facet Advani, Jayshree
Sharma, Kusum
Verma, Renu
Chatterjee, Oishi
Solanki, Hitendra S.
Sharma, Aman
Varma, Subhash
Modi, Manish
Ray, Pallab
Sharma, Megha
Dhillion, M.S.
Pandey, Akhilesh
Gowda, Harsha
Prasad, T.S. Keshava
author_sort Advani, Jayshree
collection PubMed
description This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and promoter regions were identified in the whole genome sequencing analysis. Among the identified SNVs, 18 SNVs were identified in genes known to be associated with first and second line drug resistance. The data is related to the research article “Whole genome sequencing of Mycobacterium tuberculosis isolates from extrapulmonary sites” (Sharma et al., 2017) [1].
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spelling pubmed-61279792018-09-07 Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India Advani, Jayshree Sharma, Kusum Verma, Renu Chatterjee, Oishi Solanki, Hitendra S. Sharma, Aman Varma, Subhash Modi, Manish Ray, Pallab Sharma, Megha Dhillion, M.S. Pandey, Akhilesh Gowda, Harsha Prasad, T.S. Keshava Data Brief Genetics, Genomics and Molecular Biology This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and promoter regions were identified in the whole genome sequencing analysis. Among the identified SNVs, 18 SNVs were identified in genes known to be associated with first and second line drug resistance. The data is related to the research article “Whole genome sequencing of Mycobacterium tuberculosis isolates from extrapulmonary sites” (Sharma et al., 2017) [1]. Elsevier 2018-08-24 /pmc/articles/PMC6127979/ /pubmed/30197919 http://dx.doi.org/10.1016/j.dib.2018.08.048 Text en © 2018 Published by Elsevier Inc. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Advani, Jayshree
Sharma, Kusum
Verma, Renu
Chatterjee, Oishi
Solanki, Hitendra S.
Sharma, Aman
Varma, Subhash
Modi, Manish
Ray, Pallab
Sharma, Megha
Dhillion, M.S.
Pandey, Akhilesh
Gowda, Harsha
Prasad, T.S. Keshava
Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India
title Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India
title_full Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India
title_fullStr Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India
title_full_unstemmed Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India
title_short Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India
title_sort data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from india
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6127979/
https://www.ncbi.nlm.nih.gov/pubmed/30197919
http://dx.doi.org/10.1016/j.dib.2018.08.048
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