Cargando…

Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type

We describe convergent evidence from transcriptomics, morphology and physiology for a specialized GABAergic neuron subtype in human cortex. Using unbiased single nucleus RNA sequencing, we identify ten GABAergic interneuron subtypes with combinatorial gene signatures in human cortical layer 1 and ch...

Descripción completa

Detalles Bibliográficos
Autores principales: Boldog, Eszter, Bakken, Trygve E., Hodge, Rebecca D., Novotny, Mark, Aevermann, Brian D., Baka, Judith, Bordé, Sándor, Close, Jennie L., Diez-Fuertes, Francisco, Ding, Song-Lin, Faragó, Nóra, Kocsis, Ágnes K., Kovács, Balázs, Maltzer, Zoe, McCorrison, Jamison M., Miller, Jeremy A., Molnár, Gábor, Oláh, Gáspár, Ozsvár, Attila, Rózsa, Márton, Shehata, Soraya I., Smith, Kimberly A., Sunkin, Susan M., Tran, Danny N., Venepally, Pratap, Wall, Abby, Puskás, László G., Barzó, Pál, Steemers, Frank J., Schork, Nicholas J., Scheuermann, Richard H., Lasken, Roger S., Lein, Ed S., Tamás, Gábor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6130849/
https://www.ncbi.nlm.nih.gov/pubmed/30150662
http://dx.doi.org/10.1038/s41593-018-0205-2
_version_ 1783354017847443456
author Boldog, Eszter
Bakken, Trygve E.
Hodge, Rebecca D.
Novotny, Mark
Aevermann, Brian D.
Baka, Judith
Bordé, Sándor
Close, Jennie L.
Diez-Fuertes, Francisco
Ding, Song-Lin
Faragó, Nóra
Kocsis, Ágnes K.
Kovács, Balázs
Maltzer, Zoe
McCorrison, Jamison M.
Miller, Jeremy A.
Molnár, Gábor
Oláh, Gáspár
Ozsvár, Attila
Rózsa, Márton
Shehata, Soraya I.
Smith, Kimberly A.
Sunkin, Susan M.
Tran, Danny N.
Venepally, Pratap
Wall, Abby
Puskás, László G.
Barzó, Pál
Steemers, Frank J.
Schork, Nicholas J.
Scheuermann, Richard H.
Lasken, Roger S.
Lein, Ed S.
Tamás, Gábor
author_facet Boldog, Eszter
Bakken, Trygve E.
Hodge, Rebecca D.
Novotny, Mark
Aevermann, Brian D.
Baka, Judith
Bordé, Sándor
Close, Jennie L.
Diez-Fuertes, Francisco
Ding, Song-Lin
Faragó, Nóra
Kocsis, Ágnes K.
Kovács, Balázs
Maltzer, Zoe
McCorrison, Jamison M.
Miller, Jeremy A.
Molnár, Gábor
Oláh, Gáspár
Ozsvár, Attila
Rózsa, Márton
Shehata, Soraya I.
Smith, Kimberly A.
Sunkin, Susan M.
Tran, Danny N.
Venepally, Pratap
Wall, Abby
Puskás, László G.
Barzó, Pál
Steemers, Frank J.
Schork, Nicholas J.
Scheuermann, Richard H.
Lasken, Roger S.
Lein, Ed S.
Tamás, Gábor
author_sort Boldog, Eszter
collection PubMed
description We describe convergent evidence from transcriptomics, morphology and physiology for a specialized GABAergic neuron subtype in human cortex. Using unbiased single nucleus RNA sequencing, we identify ten GABAergic interneuron subtypes with combinatorial gene signatures in human cortical layer 1 and characterize a novel group of human interneurons with anatomical features never described in rodents having large, “rosehip”-like axonal boutons and compact arborization. These rosehip cells show an immunohistochemical profile (GAD1/CCK-positive, CNR1/SST/CALB2/PVALB-negative) matching a single transcriptomically-defined cell type whose specific molecular marker signature is not seen in mouse cortex. Rosehip cells in layer 1 make homotypic gap junctions, predominantly target apical dendritic shafts of layer 3 pyramidal neurons and inhibit backpropagating pyramidal action potentials in microdomains of the dendritic tuft. These cells are therefore positioned for potent local control of distal dendritic computation in cortical pyramidal neurons.
format Online
Article
Text
id pubmed-6130849
institution National Center for Biotechnology Information
language English
publishDate 2018
record_format MEDLINE/PubMed
spelling pubmed-61308492019-02-27 Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type Boldog, Eszter Bakken, Trygve E. Hodge, Rebecca D. Novotny, Mark Aevermann, Brian D. Baka, Judith Bordé, Sándor Close, Jennie L. Diez-Fuertes, Francisco Ding, Song-Lin Faragó, Nóra Kocsis, Ágnes K. Kovács, Balázs Maltzer, Zoe McCorrison, Jamison M. Miller, Jeremy A. Molnár, Gábor Oláh, Gáspár Ozsvár, Attila Rózsa, Márton Shehata, Soraya I. Smith, Kimberly A. Sunkin, Susan M. Tran, Danny N. Venepally, Pratap Wall, Abby Puskás, László G. Barzó, Pál Steemers, Frank J. Schork, Nicholas J. Scheuermann, Richard H. Lasken, Roger S. Lein, Ed S. Tamás, Gábor Nat Neurosci Article We describe convergent evidence from transcriptomics, morphology and physiology for a specialized GABAergic neuron subtype in human cortex. Using unbiased single nucleus RNA sequencing, we identify ten GABAergic interneuron subtypes with combinatorial gene signatures in human cortical layer 1 and characterize a novel group of human interneurons with anatomical features never described in rodents having large, “rosehip”-like axonal boutons and compact arborization. These rosehip cells show an immunohistochemical profile (GAD1/CCK-positive, CNR1/SST/CALB2/PVALB-negative) matching a single transcriptomically-defined cell type whose specific molecular marker signature is not seen in mouse cortex. Rosehip cells in layer 1 make homotypic gap junctions, predominantly target apical dendritic shafts of layer 3 pyramidal neurons and inhibit backpropagating pyramidal action potentials in microdomains of the dendritic tuft. These cells are therefore positioned for potent local control of distal dendritic computation in cortical pyramidal neurons. 2018-08-27 2018-09 /pmc/articles/PMC6130849/ /pubmed/30150662 http://dx.doi.org/10.1038/s41593-018-0205-2 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Boldog, Eszter
Bakken, Trygve E.
Hodge, Rebecca D.
Novotny, Mark
Aevermann, Brian D.
Baka, Judith
Bordé, Sándor
Close, Jennie L.
Diez-Fuertes, Francisco
Ding, Song-Lin
Faragó, Nóra
Kocsis, Ágnes K.
Kovács, Balázs
Maltzer, Zoe
McCorrison, Jamison M.
Miller, Jeremy A.
Molnár, Gábor
Oláh, Gáspár
Ozsvár, Attila
Rózsa, Márton
Shehata, Soraya I.
Smith, Kimberly A.
Sunkin, Susan M.
Tran, Danny N.
Venepally, Pratap
Wall, Abby
Puskás, László G.
Barzó, Pál
Steemers, Frank J.
Schork, Nicholas J.
Scheuermann, Richard H.
Lasken, Roger S.
Lein, Ed S.
Tamás, Gábor
Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type
title Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type
title_full Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type
title_fullStr Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type
title_full_unstemmed Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type
title_short Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type
title_sort transcriptomic and morphophysiological evidence for a specialized human cortical gabaergic cell type
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6130849/
https://www.ncbi.nlm.nih.gov/pubmed/30150662
http://dx.doi.org/10.1038/s41593-018-0205-2
work_keys_str_mv AT boldogeszter transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT bakkentrygvee transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT hodgerebeccad transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT novotnymark transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT aevermannbriand transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT bakajudith transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT bordesandor transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT closejenniel transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT diezfuertesfrancisco transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT dingsonglin transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT faragonora transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT kocsisagnesk transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT kovacsbalazs transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT maltzerzoe transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT mccorrisonjamisonm transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT millerjeremya transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT molnargabor transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT olahgaspar transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT ozsvarattila transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT rozsamarton transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT shehatasorayai transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT smithkimberlya transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT sunkinsusanm transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT trandannyn transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT venepallypratap transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT wallabby transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT puskaslaszlog transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT barzopal transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT steemersfrankj transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT schorknicholasj transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT scheuermannrichardh transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT laskenrogers transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT leineds transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype
AT tamasgabor transcriptomicandmorphophysiologicalevidenceforaspecializedhumancorticalgabaergiccelltype