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Analyzing protein topology based on Laguerre tessellation of a pore-traversing water network
Given the tight relation between protein structure and function, we present a set of methods to analyze protein topology, implemented in the VLDP program, relying on Laguerre space partitions built from series of molecular dynamics snapshots. The Laguerre partition specifies inter-atomic contacts, f...
Autores principales: | Esque, Jérémy, Sansom, Mark S. P., Baaden, Marc, Oguey, Christophe |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6131185/ https://www.ncbi.nlm.nih.gov/pubmed/30202114 http://dx.doi.org/10.1038/s41598-018-31422-5 |
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