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Optimal Bayesian estimators for latent variable cluster models
In cluster analysis interest lies in probabilistically capturing partitions of individuals, items or observations into groups, such that those belonging to the same group share similar attributes or relational profiles. Bayesian posterior samples for the latent allocation variables can be effectivel...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6133164/ https://www.ncbi.nlm.nih.gov/pubmed/30220822 http://dx.doi.org/10.1007/s11222-017-9786-y |
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author | Rastelli, Riccardo Friel, Nial |
author_facet | Rastelli, Riccardo Friel, Nial |
author_sort | Rastelli, Riccardo |
collection | PubMed |
description | In cluster analysis interest lies in probabilistically capturing partitions of individuals, items or observations into groups, such that those belonging to the same group share similar attributes or relational profiles. Bayesian posterior samples for the latent allocation variables can be effectively obtained in a wide range of clustering models, including finite mixtures, infinite mixtures, hidden Markov models and block models for networks. However, due to the categorical nature of the clustering variables and the lack of scalable algorithms, summary tools that can interpret such samples are not available. We adopt a Bayesian decision theoretical approach to define an optimality criterion for clusterings and propose a fast and context-independent greedy algorithm to find the best allocations. One important facet of our approach is that the optimal number of groups is automatically selected, thereby solving the clustering and the model-choice problems at the same time. We consider several loss functions to compare partitions and show that our approach can accommodate a wide range of cases. Finally, we illustrate our approach on both artificial and real datasets for three different clustering models: Gaussian mixtures, stochastic block models and latent block models for networks. |
format | Online Article Text |
id | pubmed-6133164 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-61331642018-09-14 Optimal Bayesian estimators for latent variable cluster models Rastelli, Riccardo Friel, Nial Stat Comput Article In cluster analysis interest lies in probabilistically capturing partitions of individuals, items or observations into groups, such that those belonging to the same group share similar attributes or relational profiles. Bayesian posterior samples for the latent allocation variables can be effectively obtained in a wide range of clustering models, including finite mixtures, infinite mixtures, hidden Markov models and block models for networks. However, due to the categorical nature of the clustering variables and the lack of scalable algorithms, summary tools that can interpret such samples are not available. We adopt a Bayesian decision theoretical approach to define an optimality criterion for clusterings and propose a fast and context-independent greedy algorithm to find the best allocations. One important facet of our approach is that the optimal number of groups is automatically selected, thereby solving the clustering and the model-choice problems at the same time. We consider several loss functions to compare partitions and show that our approach can accommodate a wide range of cases. Finally, we illustrate our approach on both artificial and real datasets for three different clustering models: Gaussian mixtures, stochastic block models and latent block models for networks. Springer US 2017-10-31 2018 /pmc/articles/PMC6133164/ /pubmed/30220822 http://dx.doi.org/10.1007/s11222-017-9786-y Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Rastelli, Riccardo Friel, Nial Optimal Bayesian estimators for latent variable cluster models |
title | Optimal Bayesian estimators for latent variable cluster models |
title_full | Optimal Bayesian estimators for latent variable cluster models |
title_fullStr | Optimal Bayesian estimators for latent variable cluster models |
title_full_unstemmed | Optimal Bayesian estimators for latent variable cluster models |
title_short | Optimal Bayesian estimators for latent variable cluster models |
title_sort | optimal bayesian estimators for latent variable cluster models |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6133164/ https://www.ncbi.nlm.nih.gov/pubmed/30220822 http://dx.doi.org/10.1007/s11222-017-9786-y |
work_keys_str_mv | AT rastelliriccardo optimalbayesianestimatorsforlatentvariableclustermodels AT frielnial optimalbayesianestimatorsforlatentvariableclustermodels |