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Fitness effects of altering gene expression noise in Saccharomyces cerevisiae
Gene expression noise is an evolvable property of biological systems that describes differences in expression among genetically identical cells in the same environment. Prior work has shown that expression noise is heritable and can be shaped by selection, but the impact of variation in expression n...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6133559/ https://www.ncbi.nlm.nih.gov/pubmed/30124429 http://dx.doi.org/10.7554/eLife.37272 |
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author | Duveau, Fabien Hodgins-Davis, Andrea Metzger, Brian PH Yang, Bing Tryban, Stephen Walker, Elizabeth A Lybrook, Tricia Wittkopp, Patricia J |
author_facet | Duveau, Fabien Hodgins-Davis, Andrea Metzger, Brian PH Yang, Bing Tryban, Stephen Walker, Elizabeth A Lybrook, Tricia Wittkopp, Patricia J |
author_sort | Duveau, Fabien |
collection | PubMed |
description | Gene expression noise is an evolvable property of biological systems that describes differences in expression among genetically identical cells in the same environment. Prior work has shown that expression noise is heritable and can be shaped by selection, but the impact of variation in expression noise on organismal fitness has proven difficult to measure. Here, we quantify the fitness effects of altering expression noise for the TDH3 gene in Saccharomyces cerevisiae. We show that increases in expression noise can be deleterious or beneficial depending on the difference between the average expression level of a genotype and the expression level maximizing fitness. We also show that a simple model relating single-cell expression levels to population growth produces patterns consistent with our empirical data. We use this model to explore a broad range of average expression levels and expression noise, providing additional insight into the fitness effects of variation in expression noise. |
format | Online Article Text |
id | pubmed-6133559 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-61335592018-09-13 Fitness effects of altering gene expression noise in Saccharomyces cerevisiae Duveau, Fabien Hodgins-Davis, Andrea Metzger, Brian PH Yang, Bing Tryban, Stephen Walker, Elizabeth A Lybrook, Tricia Wittkopp, Patricia J eLife Evolutionary Biology Gene expression noise is an evolvable property of biological systems that describes differences in expression among genetically identical cells in the same environment. Prior work has shown that expression noise is heritable and can be shaped by selection, but the impact of variation in expression noise on organismal fitness has proven difficult to measure. Here, we quantify the fitness effects of altering expression noise for the TDH3 gene in Saccharomyces cerevisiae. We show that increases in expression noise can be deleterious or beneficial depending on the difference between the average expression level of a genotype and the expression level maximizing fitness. We also show that a simple model relating single-cell expression levels to population growth produces patterns consistent with our empirical data. We use this model to explore a broad range of average expression levels and expression noise, providing additional insight into the fitness effects of variation in expression noise. eLife Sciences Publications, Ltd 2018-08-20 /pmc/articles/PMC6133559/ /pubmed/30124429 http://dx.doi.org/10.7554/eLife.37272 Text en © 2018, Duveau et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Evolutionary Biology Duveau, Fabien Hodgins-Davis, Andrea Metzger, Brian PH Yang, Bing Tryban, Stephen Walker, Elizabeth A Lybrook, Tricia Wittkopp, Patricia J Fitness effects of altering gene expression noise in Saccharomyces cerevisiae |
title | Fitness effects of altering gene expression noise in Saccharomyces cerevisiae |
title_full | Fitness effects of altering gene expression noise in Saccharomyces cerevisiae |
title_fullStr | Fitness effects of altering gene expression noise in Saccharomyces cerevisiae |
title_full_unstemmed | Fitness effects of altering gene expression noise in Saccharomyces cerevisiae |
title_short | Fitness effects of altering gene expression noise in Saccharomyces cerevisiae |
title_sort | fitness effects of altering gene expression noise in saccharomyces cerevisiae |
topic | Evolutionary Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6133559/ https://www.ncbi.nlm.nih.gov/pubmed/30124429 http://dx.doi.org/10.7554/eLife.37272 |
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