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Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere

Low phosphorus soils are thought to constitute the majority of soils worldwide and cannot support intensive agriculture without high fertilizer inputs. Rhizobacteria are well-known to modify P dynamics and an increased bacterial diversity normally has a positive impact on various process rates. Howe...

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Autores principales: Irshad, Usman, Yergeau, Etienne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6134019/
https://www.ncbi.nlm.nih.gov/pubmed/30233510
http://dx.doi.org/10.3389/fmicb.2018.01990
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author Irshad, Usman
Yergeau, Etienne
author_facet Irshad, Usman
Yergeau, Etienne
author_sort Irshad, Usman
collection PubMed
description Low phosphorus soils are thought to constitute the majority of soils worldwide and cannot support intensive agriculture without high fertilizer inputs. Rhizobacteria are well-known to modify P dynamics and an increased bacterial diversity normally has a positive impact on various process rates. However, it is not known how variation in bacterial diversity at the subspecies level could influence trophic interactions in the rhizosphere and its consequences on plant P nutrition. We therefore hypothesized that the interactions between closely related P solubilizing bacteria and their grazing nematodes could improve plant P dynamics from an unavailable P source. We isolated four Pseudomonas poae strains and extracted nematodes from a Saskatchewan wheat field soil sample. The potential of all bacterial isolates with and without nematodes for increasing P availability in the wheat rhizosphere was tested in controlled microcosms with Ca(3)(PO(4))(2) as sole P source. Liberated P, phosphatase activity, plant P and bacterial abundance based on phnX gene copies were determined. Phosphorus solubilization efficiency of isolates varied between isolates whereas phosphatase enzyme activity was only detected under nematodes grazing and during the first 15 days of the experiment. Nematodes grazing upon individual Pseudomonas poae increased phosphatase enzyme activity, bacterial abundance, but decreased plant P concentration compared to non-grazed system. In contrast, the treatment combining all Pseudomonas poae isolates together with nematodes resulted in significant increases in P availability and plant P concentration. Diverse P-solubilizing efficiency and interaction with nematodes within the same bacterial “species” suggest that P dynamics might be linked to micro variation in soil diversity that would not accurately be picked up using common tools such as 16S rRNA gene sequencing.
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spelling pubmed-61340192018-09-19 Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere Irshad, Usman Yergeau, Etienne Front Microbiol Microbiology Low phosphorus soils are thought to constitute the majority of soils worldwide and cannot support intensive agriculture without high fertilizer inputs. Rhizobacteria are well-known to modify P dynamics and an increased bacterial diversity normally has a positive impact on various process rates. However, it is not known how variation in bacterial diversity at the subspecies level could influence trophic interactions in the rhizosphere and its consequences on plant P nutrition. We therefore hypothesized that the interactions between closely related P solubilizing bacteria and their grazing nematodes could improve plant P dynamics from an unavailable P source. We isolated four Pseudomonas poae strains and extracted nematodes from a Saskatchewan wheat field soil sample. The potential of all bacterial isolates with and without nematodes for increasing P availability in the wheat rhizosphere was tested in controlled microcosms with Ca(3)(PO(4))(2) as sole P source. Liberated P, phosphatase activity, plant P and bacterial abundance based on phnX gene copies were determined. Phosphorus solubilization efficiency of isolates varied between isolates whereas phosphatase enzyme activity was only detected under nematodes grazing and during the first 15 days of the experiment. Nematodes grazing upon individual Pseudomonas poae increased phosphatase enzyme activity, bacterial abundance, but decreased plant P concentration compared to non-grazed system. In contrast, the treatment combining all Pseudomonas poae isolates together with nematodes resulted in significant increases in P availability and plant P concentration. Diverse P-solubilizing efficiency and interaction with nematodes within the same bacterial “species” suggest that P dynamics might be linked to micro variation in soil diversity that would not accurately be picked up using common tools such as 16S rRNA gene sequencing. Frontiers Media S.A. 2018-09-05 /pmc/articles/PMC6134019/ /pubmed/30233510 http://dx.doi.org/10.3389/fmicb.2018.01990 Text en Copyright © 2018 Irshad and Yergeau. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Irshad, Usman
Yergeau, Etienne
Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_full Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_fullStr Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_full_unstemmed Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_short Bacterial Subspecies Variation and Nematode Grazing Change P Dynamics in the Wheat Rhizosphere
title_sort bacterial subspecies variation and nematode grazing change p dynamics in the wheat rhizosphere
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6134019/
https://www.ncbi.nlm.nih.gov/pubmed/30233510
http://dx.doi.org/10.3389/fmicb.2018.01990
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