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Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study

Background: Current standard methods used to detect and monitor bladder cancer (BC) are invasive or have low sensitivity. We have previously reported in an international European study four non-invasive tests for BC diagnosis based on the gene expression patterns of urine. Objective: to validate the...

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Autores principales: Han, Chengtao, Mengual, Lourdes, Kang, Bin, Lozano, Juan José, Yang, Xiaoqun, Zhang, Cuizhu, Alcaraz, Antonio, Liang, Ji, Ye, Dingwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6134826/
https://www.ncbi.nlm.nih.gov/pubmed/30210644
http://dx.doi.org/10.7150/jca.24506
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author Han, Chengtao
Mengual, Lourdes
Kang, Bin
Lozano, Juan José
Yang, Xiaoqun
Zhang, Cuizhu
Alcaraz, Antonio
Liang, Ji
Ye, Dingwei
author_facet Han, Chengtao
Mengual, Lourdes
Kang, Bin
Lozano, Juan José
Yang, Xiaoqun
Zhang, Cuizhu
Alcaraz, Antonio
Liang, Ji
Ye, Dingwei
author_sort Han, Chengtao
collection PubMed
description Background: Current standard methods used to detect and monitor bladder cancer (BC) are invasive or have low sensitivity. We have previously reported in an international European study four non-invasive tests for BC diagnosis based on the gene expression patterns of urine. Objective: to validate the tests in an independent Asian cohort. Design, setting and participants: Prospective blinded study in which consecutive voided urine samples from BC patients and controls (n=520) were collected in the Fudan University Shanghai Cancer Center from 2014-2016. Gene expression values were quantified using TaqMan Arrays. The same cut-off as previously reported for discrimination between tumours and controls was used in this validation study. Results and limitations: Finally, a total of 257 tumour and 132 control urine samples were analysed. We found a high accuracy for the four gene classifiers in this independent Asian set, the classifiers composed of 5 and 10 genes achieved the best sensitivity (80.54% and 81.32%, respectively) maintaining a high specificity (91.67% and 85.61%, respectively). Sensitivity of 5-gene (GS_D5) and 10-gene (GS_D10) expression classifiers in recurrent BC cases (78 and 79%, respectively) is comparable to that of primary BC cases (82%). Cytology and NMP22 identified 67% and 40%, respectively, of tumours that have been diagnosed with our tests. In addition, influence of each studied gene was analyzed and showed similar gene rank between Chinese and Caucasian population. Conclusions: Our study proves that our non-invasive diagnostic BC tests can be reproduced in independent cohorts and in an external laboratory. All the four gene classifiers have shown equal or superior performance to the current gold standard in the present and previously reported validation studies. Consequently, they may be taken for consideration as molecular tests applicable to clinical practice in the management of BC. Patient summary: Our gene classifiers achieve sensitivities up to 90% in HR NMIBC and MIBC patients, while this achievement is comparatively lower in LR NMIBC ones.
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spelling pubmed-61348262018-09-12 Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study Han, Chengtao Mengual, Lourdes Kang, Bin Lozano, Juan José Yang, Xiaoqun Zhang, Cuizhu Alcaraz, Antonio Liang, Ji Ye, Dingwei J Cancer Research Paper Background: Current standard methods used to detect and monitor bladder cancer (BC) are invasive or have low sensitivity. We have previously reported in an international European study four non-invasive tests for BC diagnosis based on the gene expression patterns of urine. Objective: to validate the tests in an independent Asian cohort. Design, setting and participants: Prospective blinded study in which consecutive voided urine samples from BC patients and controls (n=520) were collected in the Fudan University Shanghai Cancer Center from 2014-2016. Gene expression values were quantified using TaqMan Arrays. The same cut-off as previously reported for discrimination between tumours and controls was used in this validation study. Results and limitations: Finally, a total of 257 tumour and 132 control urine samples were analysed. We found a high accuracy for the four gene classifiers in this independent Asian set, the classifiers composed of 5 and 10 genes achieved the best sensitivity (80.54% and 81.32%, respectively) maintaining a high specificity (91.67% and 85.61%, respectively). Sensitivity of 5-gene (GS_D5) and 10-gene (GS_D10) expression classifiers in recurrent BC cases (78 and 79%, respectively) is comparable to that of primary BC cases (82%). Cytology and NMP22 identified 67% and 40%, respectively, of tumours that have been diagnosed with our tests. In addition, influence of each studied gene was analyzed and showed similar gene rank between Chinese and Caucasian population. Conclusions: Our study proves that our non-invasive diagnostic BC tests can be reproduced in independent cohorts and in an external laboratory. All the four gene classifiers have shown equal or superior performance to the current gold standard in the present and previously reported validation studies. Consequently, they may be taken for consideration as molecular tests applicable to clinical practice in the management of BC. Patient summary: Our gene classifiers achieve sensitivities up to 90% in HR NMIBC and MIBC patients, while this achievement is comparatively lower in LR NMIBC ones. Ivyspring International Publisher 2018-08-06 /pmc/articles/PMC6134826/ /pubmed/30210644 http://dx.doi.org/10.7150/jca.24506 Text en © Ivyspring International Publisher This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY-NC) license (https://creativecommons.org/licenses/by-nc/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Research Paper
Han, Chengtao
Mengual, Lourdes
Kang, Bin
Lozano, Juan José
Yang, Xiaoqun
Zhang, Cuizhu
Alcaraz, Antonio
Liang, Ji
Ye, Dingwei
Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study
title Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study
title_full Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study
title_fullStr Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study
title_full_unstemmed Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study
title_short Validation of Urine-based Gene Classifiers for Detecting Bladder Cancer in a Chinese Study
title_sort validation of urine-based gene classifiers for detecting bladder cancer in a chinese study
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6134826/
https://www.ncbi.nlm.nih.gov/pubmed/30210644
http://dx.doi.org/10.7150/jca.24506
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