Cargando…

Use of reproducible research practices in public health: A survey of public health analysts

OBJECTIVE: Use of reproducible research practices improves the quality of science and the speed of scientific development. We sought to understand use of reproducible research practices in public health and associated barriers and facilitators. METHODS: In late 2017, we surveyed members of the Ameri...

Descripción completa

Detalles Bibliográficos
Autores principales: Harris, Jenine K., Johnson, Kimberly J., Carothers, Bobbi J., Combs, Todd B., Luke, Douglas A., Wang, Xiaoyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135378/
https://www.ncbi.nlm.nih.gov/pubmed/30208041
http://dx.doi.org/10.1371/journal.pone.0202447
_version_ 1783354809034735616
author Harris, Jenine K.
Johnson, Kimberly J.
Carothers, Bobbi J.
Combs, Todd B.
Luke, Douglas A.
Wang, Xiaoyan
author_facet Harris, Jenine K.
Johnson, Kimberly J.
Carothers, Bobbi J.
Combs, Todd B.
Luke, Douglas A.
Wang, Xiaoyan
author_sort Harris, Jenine K.
collection PubMed
description OBJECTIVE: Use of reproducible research practices improves the quality of science and the speed of scientific development. We sought to understand use of reproducible research practices in public health and associated barriers and facilitators. METHODS: In late 2017, we surveyed members of the American Public Health Association Applied Public Health Statistics section and others; 247 of 278 who screened eligible answered the survey, and 209 answered every applicable question. The survey included questions about file management, code annotation and documentation, reproducibility of analyses, and facilitators and barriers of using reproducible practices. RESULTS: Just 14.4% of participants had shared code, data, or both. Many participants reported their data (33%) and code (43.2%) would be difficult for colleagues to find if they left their institution. Top reported barriers to using reproducible practices were data privacy (49.8%) and lack of time (41.7%). Participants suggested training (50.9%) and requirements by journals (44.4%) and funders (40.2%) to increase use of reproducible research practices. CONCLUSIONS: Increasing use of reproducible research practices is important for public health and requires action from researchers, training programs, funders, and journals.
format Online
Article
Text
id pubmed-6135378
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-61353782018-09-27 Use of reproducible research practices in public health: A survey of public health analysts Harris, Jenine K. Johnson, Kimberly J. Carothers, Bobbi J. Combs, Todd B. Luke, Douglas A. Wang, Xiaoyan PLoS One Research Article OBJECTIVE: Use of reproducible research practices improves the quality of science and the speed of scientific development. We sought to understand use of reproducible research practices in public health and associated barriers and facilitators. METHODS: In late 2017, we surveyed members of the American Public Health Association Applied Public Health Statistics section and others; 247 of 278 who screened eligible answered the survey, and 209 answered every applicable question. The survey included questions about file management, code annotation and documentation, reproducibility of analyses, and facilitators and barriers of using reproducible practices. RESULTS: Just 14.4% of participants had shared code, data, or both. Many participants reported their data (33%) and code (43.2%) would be difficult for colleagues to find if they left their institution. Top reported barriers to using reproducible practices were data privacy (49.8%) and lack of time (41.7%). Participants suggested training (50.9%) and requirements by journals (44.4%) and funders (40.2%) to increase use of reproducible research practices. CONCLUSIONS: Increasing use of reproducible research practices is important for public health and requires action from researchers, training programs, funders, and journals. Public Library of Science 2018-09-12 /pmc/articles/PMC6135378/ /pubmed/30208041 http://dx.doi.org/10.1371/journal.pone.0202447 Text en © 2018 Harris et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Harris, Jenine K.
Johnson, Kimberly J.
Carothers, Bobbi J.
Combs, Todd B.
Luke, Douglas A.
Wang, Xiaoyan
Use of reproducible research practices in public health: A survey of public health analysts
title Use of reproducible research practices in public health: A survey of public health analysts
title_full Use of reproducible research practices in public health: A survey of public health analysts
title_fullStr Use of reproducible research practices in public health: A survey of public health analysts
title_full_unstemmed Use of reproducible research practices in public health: A survey of public health analysts
title_short Use of reproducible research practices in public health: A survey of public health analysts
title_sort use of reproducible research practices in public health: a survey of public health analysts
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135378/
https://www.ncbi.nlm.nih.gov/pubmed/30208041
http://dx.doi.org/10.1371/journal.pone.0202447
work_keys_str_mv AT harrisjeninek useofreproducibleresearchpracticesinpublichealthasurveyofpublichealthanalysts
AT johnsonkimberlyj useofreproducibleresearchpracticesinpublichealthasurveyofpublichealthanalysts
AT carothersbobbij useofreproducibleresearchpracticesinpublichealthasurveyofpublichealthanalysts
AT combstoddb useofreproducibleresearchpracticesinpublichealthasurveyofpublichealthanalysts
AT lukedouglasa useofreproducibleresearchpracticesinpublichealthasurveyofpublichealthanalysts
AT wangxiaoyan useofreproducibleresearchpracticesinpublichealthasurveyofpublichealthanalysts