Cargando…
Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism
Poly(ADP-ribose) polymerase 1 (PARP1) is both a first responder to DNA damage and a chromatin architectural protein. How PARP1 rapidly finds DNA damage sites in the context of a nucleus filled with undamaged DNA, to which it also binds, is an unresolved question. Here, we show that PARP1 association...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135609/ https://www.ncbi.nlm.nih.gov/pubmed/30088474 http://dx.doi.org/10.7554/eLife.37818 |
_version_ | 1783354854959218688 |
---|---|
author | Rudolph, Johannes Mahadevan, Jyothi Dyer, Pamela Luger, Karolin |
author_facet | Rudolph, Johannes Mahadevan, Jyothi Dyer, Pamela Luger, Karolin |
author_sort | Rudolph, Johannes |
collection | PubMed |
description | Poly(ADP-ribose) polymerase 1 (PARP1) is both a first responder to DNA damage and a chromatin architectural protein. How PARP1 rapidly finds DNA damage sites in the context of a nucleus filled with undamaged DNA, to which it also binds, is an unresolved question. Here, we show that PARP1 association with DNA is diffusion-limited, and release of PARP1 from DNA is promoted by binding of an additional DNA molecule that facilitates a ‘monkey bar’ mechanism, also known as intersegment transfer. The WGR-domain of PARP1 is essential to this mechanism, and a point mutation (W589A) recapitulates the altered kinetics of the domain deletion. Demonstrating the physiological importance of the monkey bar mechanism for PARP1 function, the W589A mutant accumulates at sites of DNA damage more slowly following laser micro-irradiation than wild-type PARP1. Clinically relevant inhibitors of PARP1 did not alter the rate or mechanism of the release of PARP1 from DNA. |
format | Online Article Text |
id | pubmed-6135609 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-61356092018-09-13 Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism Rudolph, Johannes Mahadevan, Jyothi Dyer, Pamela Luger, Karolin eLife Biochemistry and Chemical Biology Poly(ADP-ribose) polymerase 1 (PARP1) is both a first responder to DNA damage and a chromatin architectural protein. How PARP1 rapidly finds DNA damage sites in the context of a nucleus filled with undamaged DNA, to which it also binds, is an unresolved question. Here, we show that PARP1 association with DNA is diffusion-limited, and release of PARP1 from DNA is promoted by binding of an additional DNA molecule that facilitates a ‘monkey bar’ mechanism, also known as intersegment transfer. The WGR-domain of PARP1 is essential to this mechanism, and a point mutation (W589A) recapitulates the altered kinetics of the domain deletion. Demonstrating the physiological importance of the monkey bar mechanism for PARP1 function, the W589A mutant accumulates at sites of DNA damage more slowly following laser micro-irradiation than wild-type PARP1. Clinically relevant inhibitors of PARP1 did not alter the rate or mechanism of the release of PARP1 from DNA. eLife Sciences Publications, Ltd 2018-08-08 /pmc/articles/PMC6135609/ /pubmed/30088474 http://dx.doi.org/10.7554/eLife.37818 Text en © 2018, Rudolph et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Biochemistry and Chemical Biology Rudolph, Johannes Mahadevan, Jyothi Dyer, Pamela Luger, Karolin Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism |
title | Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism |
title_full | Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism |
title_fullStr | Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism |
title_full_unstemmed | Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism |
title_short | Poly(ADP-ribose) polymerase 1 searches DNA via a ‘monkey bar’ mechanism |
title_sort | poly(adp-ribose) polymerase 1 searches dna via a ‘monkey bar’ mechanism |
topic | Biochemistry and Chemical Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135609/ https://www.ncbi.nlm.nih.gov/pubmed/30088474 http://dx.doi.org/10.7554/eLife.37818 |
work_keys_str_mv | AT rudolphjohannes polyadpribosepolymerase1searchesdnaviaamonkeybarmechanism AT mahadevanjyothi polyadpribosepolymerase1searchesdnaviaamonkeybarmechanism AT dyerpamela polyadpribosepolymerase1searchesdnaviaamonkeybarmechanism AT lugerkarolin polyadpribosepolymerase1searchesdnaviaamonkeybarmechanism |