Cargando…

Statistical Dynamics of Spatial-Order Formation by Communicating Cells

Communicating cells can coordinate their gene expressions to form spatial patterns, generating order from disorder. Ubiquitous “secrete-and-sense cells” secrete and sense the same molecule to do so. Here we present a modeling framework—based on cellular automata and mimicking approaches of statistic...

Descripción completa

Detalles Bibliográficos
Autores principales: Olimpio, Eduardo P., Dang, Yiteng, Youk, Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135931/
https://www.ncbi.nlm.nih.gov/pubmed/30428376
http://dx.doi.org/10.1016/j.isci.2018.03.013
_version_ 1783354906717978624
author Olimpio, Eduardo P.
Dang, Yiteng
Youk, Hyun
author_facet Olimpio, Eduardo P.
Dang, Yiteng
Youk, Hyun
author_sort Olimpio, Eduardo P.
collection PubMed
description Communicating cells can coordinate their gene expressions to form spatial patterns, generating order from disorder. Ubiquitous “secrete-and-sense cells” secrete and sense the same molecule to do so. Here we present a modeling framework—based on cellular automata and mimicking approaches of statistical mechanics—for understanding how secrete-and-sense cells with bistable gene expression, from disordered beginnings, can become spatially ordered by communicating through rapidly diffusing molecules. Classifying lattices of cells by two “macrostate” variables—“spatial index,” measuring degree of order, and average gene-expression level—reveals a conceptual picture: a group of cells behaves as a single particle, in an abstract space, that rolls down on an adhesive “pseudo-energy landscape” whose shape is determined by cell-cell communication and an intracellular gene-regulatory circuit. Particles rolling down the landscape represent cells becoming more spatially ordered. We show how to extend this framework to more complex forms of cellular communication.
format Online
Article
Text
id pubmed-6135931
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-61359312018-09-17 Statistical Dynamics of Spatial-Order Formation by Communicating Cells Olimpio, Eduardo P. Dang, Yiteng Youk, Hyun iScience Article Communicating cells can coordinate their gene expressions to form spatial patterns, generating order from disorder. Ubiquitous “secrete-and-sense cells” secrete and sense the same molecule to do so. Here we present a modeling framework—based on cellular automata and mimicking approaches of statistical mechanics—for understanding how secrete-and-sense cells with bistable gene expression, from disordered beginnings, can become spatially ordered by communicating through rapidly diffusing molecules. Classifying lattices of cells by two “macrostate” variables—“spatial index,” measuring degree of order, and average gene-expression level—reveals a conceptual picture: a group of cells behaves as a single particle, in an abstract space, that rolls down on an adhesive “pseudo-energy landscape” whose shape is determined by cell-cell communication and an intracellular gene-regulatory circuit. Particles rolling down the landscape represent cells becoming more spatially ordered. We show how to extend this framework to more complex forms of cellular communication. Elsevier 2018-04-06 /pmc/articles/PMC6135931/ /pubmed/30428376 http://dx.doi.org/10.1016/j.isci.2018.03.013 Text en © 2018 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Olimpio, Eduardo P.
Dang, Yiteng
Youk, Hyun
Statistical Dynamics of Spatial-Order Formation by Communicating Cells
title Statistical Dynamics of Spatial-Order Formation by Communicating Cells
title_full Statistical Dynamics of Spatial-Order Formation by Communicating Cells
title_fullStr Statistical Dynamics of Spatial-Order Formation by Communicating Cells
title_full_unstemmed Statistical Dynamics of Spatial-Order Formation by Communicating Cells
title_short Statistical Dynamics of Spatial-Order Formation by Communicating Cells
title_sort statistical dynamics of spatial-order formation by communicating cells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135931/
https://www.ncbi.nlm.nih.gov/pubmed/30428376
http://dx.doi.org/10.1016/j.isci.2018.03.013
work_keys_str_mv AT olimpioeduardop statisticaldynamicsofspatialorderformationbycommunicatingcells
AT dangyiteng statisticaldynamicsofspatialorderformationbycommunicatingcells
AT youkhyun statisticaldynamicsofspatialorderformationbycommunicatingcells