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Statistical Dynamics of Spatial-Order Formation by Communicating Cells
Communicating cells can coordinate their gene expressions to form spatial patterns, generating order from disorder. Ubiquitous “secrete-and-sense cells” secrete and sense the same molecule to do so. Here we present a modeling framework—based on cellular automata and mimicking approaches of statistic...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135931/ https://www.ncbi.nlm.nih.gov/pubmed/30428376 http://dx.doi.org/10.1016/j.isci.2018.03.013 |
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author | Olimpio, Eduardo P. Dang, Yiteng Youk, Hyun |
author_facet | Olimpio, Eduardo P. Dang, Yiteng Youk, Hyun |
author_sort | Olimpio, Eduardo P. |
collection | PubMed |
description | Communicating cells can coordinate their gene expressions to form spatial patterns, generating order from disorder. Ubiquitous “secrete-and-sense cells” secrete and sense the same molecule to do so. Here we present a modeling framework—based on cellular automata and mimicking approaches of statistical mechanics—for understanding how secrete-and-sense cells with bistable gene expression, from disordered beginnings, can become spatially ordered by communicating through rapidly diffusing molecules. Classifying lattices of cells by two “macrostate” variables—“spatial index,” measuring degree of order, and average gene-expression level—reveals a conceptual picture: a group of cells behaves as a single particle, in an abstract space, that rolls down on an adhesive “pseudo-energy landscape” whose shape is determined by cell-cell communication and an intracellular gene-regulatory circuit. Particles rolling down the landscape represent cells becoming more spatially ordered. We show how to extend this framework to more complex forms of cellular communication. |
format | Online Article Text |
id | pubmed-6135931 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-61359312018-09-17 Statistical Dynamics of Spatial-Order Formation by Communicating Cells Olimpio, Eduardo P. Dang, Yiteng Youk, Hyun iScience Article Communicating cells can coordinate their gene expressions to form spatial patterns, generating order from disorder. Ubiquitous “secrete-and-sense cells” secrete and sense the same molecule to do so. Here we present a modeling framework—based on cellular automata and mimicking approaches of statistical mechanics—for understanding how secrete-and-sense cells with bistable gene expression, from disordered beginnings, can become spatially ordered by communicating through rapidly diffusing molecules. Classifying lattices of cells by two “macrostate” variables—“spatial index,” measuring degree of order, and average gene-expression level—reveals a conceptual picture: a group of cells behaves as a single particle, in an abstract space, that rolls down on an adhesive “pseudo-energy landscape” whose shape is determined by cell-cell communication and an intracellular gene-regulatory circuit. Particles rolling down the landscape represent cells becoming more spatially ordered. We show how to extend this framework to more complex forms of cellular communication. Elsevier 2018-04-06 /pmc/articles/PMC6135931/ /pubmed/30428376 http://dx.doi.org/10.1016/j.isci.2018.03.013 Text en © 2018 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Olimpio, Eduardo P. Dang, Yiteng Youk, Hyun Statistical Dynamics of Spatial-Order Formation by Communicating Cells |
title | Statistical Dynamics of Spatial-Order Formation by Communicating Cells |
title_full | Statistical Dynamics of Spatial-Order Formation by Communicating Cells |
title_fullStr | Statistical Dynamics of Spatial-Order Formation by Communicating Cells |
title_full_unstemmed | Statistical Dynamics of Spatial-Order Formation by Communicating Cells |
title_short | Statistical Dynamics of Spatial-Order Formation by Communicating Cells |
title_sort | statistical dynamics of spatial-order formation by communicating cells |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135931/ https://www.ncbi.nlm.nih.gov/pubmed/30428376 http://dx.doi.org/10.1016/j.isci.2018.03.013 |
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