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Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations

Studies of resting state functional MRI (rs-fRMI) are increasingly focused on “dynamics”, or on those properties of brain activation that manifest and vary on timescales shorter than the scan's full duration. This shift in focus has led to a flurry of interest in developing hypothesis testing f...

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Autores principales: Miller, Robyn L., Abrol, Anees, Adali, Tulay, Levin-Schwarz, Yuri, Calhoun, Vince D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135983/
https://www.ncbi.nlm.nih.gov/pubmed/30237758
http://dx.doi.org/10.3389/fnins.2018.00551
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author Miller, Robyn L.
Abrol, Anees
Adali, Tulay
Levin-Schwarz, Yuri
Calhoun, Vince D.
author_facet Miller, Robyn L.
Abrol, Anees
Adali, Tulay
Levin-Schwarz, Yuri
Calhoun, Vince D.
author_sort Miller, Robyn L.
collection PubMed
description Studies of resting state functional MRI (rs-fRMI) are increasingly focused on “dynamics”, or on those properties of brain activation that manifest and vary on timescales shorter than the scan's full duration. This shift in focus has led to a flurry of interest in developing hypothesis testing frameworks and null models applicable to the dynamical setting. Thus far however, these efforts have been weakened by a number of crucial shortcomings that are outlined and discussed in this article. We focus here on aspects of recently proposed null models that, we argue, are poorly formulated relative to the hypotheses they are designed to test, i.e., their potential role in separating functionally relevant BOLD signal dynamics from noise or intermittent background and maintenance type processes is limited by factors that are fundamental rather than merely quantitative or parametric. In this short position paper, we emphasize that (1) serious care must be exercised in building null models for rs-fMRI dynamics from distributionally stationary univariate or multivariate timeseries, i.e., timeseries whose values are each independently drawn from one pre-specified probability distribution; and (2) measures such as kurtosis that quantify over-concentration of observed values in the far tails of some reference distribution may not be particularly suitable for capturing signal features most plausibly contributing to functionally relevant brain dynamics. Other metrics targeted, for example, at capturing the type of epochal signal variation that is often viewed as a signature of brain responsiveness to stimuli or experimental tasks, could play a more scientifically clarifying role. As we learn more about the phenomenon of functionally relevant brain dynamics and its imaging correlates, scientifically meaningful null hypotheses and well-tuned null models will naturally emerge. We also revisit the important concept of distributional stationarity, discuss how it manifests within realizations vs. across multiple realizations, and provide guidance on the benefits and limitations of employing this type of stationarity in modeling the absence of functionally relevant temporal dynamics in resting state fMRI. We hope that the discussions herein are useful, and promote thoughtful consideration of these important issues.
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spelling pubmed-61359832018-09-20 Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations Miller, Robyn L. Abrol, Anees Adali, Tulay Levin-Schwarz, Yuri Calhoun, Vince D. Front Neurosci Neuroscience Studies of resting state functional MRI (rs-fRMI) are increasingly focused on “dynamics”, or on those properties of brain activation that manifest and vary on timescales shorter than the scan's full duration. This shift in focus has led to a flurry of interest in developing hypothesis testing frameworks and null models applicable to the dynamical setting. Thus far however, these efforts have been weakened by a number of crucial shortcomings that are outlined and discussed in this article. We focus here on aspects of recently proposed null models that, we argue, are poorly formulated relative to the hypotheses they are designed to test, i.e., their potential role in separating functionally relevant BOLD signal dynamics from noise or intermittent background and maintenance type processes is limited by factors that are fundamental rather than merely quantitative or parametric. In this short position paper, we emphasize that (1) serious care must be exercised in building null models for rs-fMRI dynamics from distributionally stationary univariate or multivariate timeseries, i.e., timeseries whose values are each independently drawn from one pre-specified probability distribution; and (2) measures such as kurtosis that quantify over-concentration of observed values in the far tails of some reference distribution may not be particularly suitable for capturing signal features most plausibly contributing to functionally relevant brain dynamics. Other metrics targeted, for example, at capturing the type of epochal signal variation that is often viewed as a signature of brain responsiveness to stimuli or experimental tasks, could play a more scientifically clarifying role. As we learn more about the phenomenon of functionally relevant brain dynamics and its imaging correlates, scientifically meaningful null hypotheses and well-tuned null models will naturally emerge. We also revisit the important concept of distributional stationarity, discuss how it manifests within realizations vs. across multiple realizations, and provide guidance on the benefits and limitations of employing this type of stationarity in modeling the absence of functionally relevant temporal dynamics in resting state fMRI. We hope that the discussions herein are useful, and promote thoughtful consideration of these important issues. Frontiers Media S.A. 2018-09-06 /pmc/articles/PMC6135983/ /pubmed/30237758 http://dx.doi.org/10.3389/fnins.2018.00551 Text en Copyright © 2018 Miller, Abrol, Adali, Levin-Schwarz and Calhoun. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Miller, Robyn L.
Abrol, Anees
Adali, Tulay
Levin-Schwarz, Yuri
Calhoun, Vince D.
Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations
title Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations
title_full Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations
title_fullStr Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations
title_full_unstemmed Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations
title_short Resting-State fMRI Dynamics and Null Models: Perspectives, Sampling Variability, and Simulations
title_sort resting-state fmri dynamics and null models: perspectives, sampling variability, and simulations
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6135983/
https://www.ncbi.nlm.nih.gov/pubmed/30237758
http://dx.doi.org/10.3389/fnins.2018.00551
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