Cargando…

A comprehensive manually-curated compendium of bovine transcription factors

Transcription factors (TFs) are pivotal regulatory proteins that control gene expression in a context-dependent and tissue-specific manner. In contrast to human, where comprehensive curated TF collections exist, bovine TFs are only rudimentary recorded and characterized. In this article, we present...

Descripción completa

Detalles Bibliográficos
Autores principales:	de Souza, Marcela M., Zerlotini, Adhemar, Geistlinger, Ludwig, Tizioto, Polyana C., Taylor, Jeremy F., Rocha, Marina I. P., Diniz, Wellison J. S., Coutinho, Luiz L., Regitano, Luciana C. A.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2018
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6137171/ https://www.ncbi.nlm.nih.gov/pubmed/30213987 http://dx.doi.org/10.1038/s41598-018-32146-2

Ejemplares similares

An integrative transcriptome analysis indicates regulatory mRNA-miRNA networks for residual feed intake in Nelore cattle
por: De Oliveira, Priscila S. N., et al.
Publicado: (2018)

Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle
por: Diniz, Wellison J. S., et al.
Publicado: (2019)

Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake
por: Tizioto, Polyana C., et al.
Publicado: (2016)

Corrigendum: Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake
por: Tizioto, Polyana C., et al.
Publicado: (2017)

Potential Biomarkers for Feed Efficiency-Related Traits in Nelore Cattle Identified by Co-expression Network and Integrative Genomics Analyses
por: de Lima, Andressa O., et al.
Publicado: (2020)

Widespread modulation of gene expression by copy number variation in skeletal muscle
por: Geistlinger, Ludwig, et al.
Publicado: (2018)

Allele-specific expression is widespread in Bos indicus muscle and affects meat quality candidate genes
por: de Souza, Marcela Maria, et al.
Publicado: (2020)

Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits
por: Cesar, Aline S. M., et al.
Publicado: (2018)

Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle
por: Diniz, Wellison Jarles da Silva, et al.
Publicado: (2016)

Co-Expression Networks Reveal Potential Regulatory Roles of miRNAs in Fatty Acid Composition of Nelore Cattle
por: de Oliveira, Priscila S.N., et al.
Publicado: (2019)

Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes
por: Tizioto, Polyana C, et al.
Publicado: (2015)

DNA methylation may affect beef tenderness through signal transduction in Bos indicus
por: de Souza, Marcela Maria, et al.
Publicado: (2022)

Differential Allele-Specific Expression Revealed Functional Variants and Candidate Genes Related to Meat Quality Traits in B. indicus Muscle
por: Bruscadin, Jennifer Jessica, et al.
Publicado: (2022)

Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approach
por: Afonso, Juliana, et al.
Publicado: (2020)

A manually curated compendium of expression profiles for the microbial cell factory Corynebacterium glutamicum
por: Kranz, Angela, et al.
Publicado: (2022)

Genome-Enabled Prediction of Breeding Values for Feedlot Average Daily Weight Gain in Nelore Cattle
por: Somavilla, Adriana L., et al.
Publicado: (2017)

Curated compendium of human transcriptional biomarker data
por: Golightly, Nathan P., et al.
Publicado: (2018)

Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content
por: Cesar, Aline S. M., et al.
Publicado: (2016)

Muscle allele-specific expression QTLs may affect meat quality traits in Bos indicus
por: Bruscadin, Jennifer Jessica, et al.
Publicado: (2021)

Repressive epigenetic mechanisms, such as the H3K27me3 histone modification, were predicted to affect muscle gene expression and its mineral content in Nelore cattle
por: Afonso, Juliana, et al.
Publicado: (2023)

Tissue Tropism in Host Transcriptional Response to Members of the Bovine Respiratory Disease Complex
por: Behura, Susanta K., et al.
Publicado: (2017)

Multi-Omics Approach Reveals miR-SNPs Affecting Muscle Fatty Acids Profile in Nelore Cattle
por: Cardoso, Tainã Figueiredo, et al.
Publicado: (2021)

CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes
por: da Silva, Vinicius, et al.
Publicado: (2019)

Muscle transcriptome analysis reveals genes and metabolic pathways related to mineral concentration in Bos indicus
por: Afonso, Juliana, et al.
Publicado: (2019)

PGMD: a comprehensive manually curated pharmacogenomic database
por: Kaplun, A, et al.
Publicado: (2016)

A Manual of Midwifery: Or Compendium of Gynæcology and Paidonosology, &c.
Publicado: (1832)

Genome-Wide Detection of CNVs and Their Association with Meat Tenderness in Nelore Cattle
por: da Silva, Vinicius Henrique, et al.
Publicado: (2016)

A curated compendium of monocyte transcriptome datasets of relevance to human monocyte immunobiology research
por: Rinchai, Darawan, et al.
Publicado: (2016)

The Allen Ancient DNA Resource (AADR): A curated compendium of ancient human genomes
por: Mallick, Swapan, et al.
Publicado: (2023)

The structure of microbial populations in Nelore GIT reveals inter-dependency of methanogens in feces and rumen
por: Andrade, Bruno G. N., et al.
Publicado: (2020)

Facilitating systems-level analyses of all-cause and Covid-mediated sepsis through SeptiSearch, a manually-curated compendium of dysregulated gene sets
por: Baghela, Arjun S., et al.
Publicado: (2023)

Machado: Open source genomics data integration framework
por: Mudadu, Mauricio de Alvarenga, et al.
Publicado: (2020)

Criteria-based curation of a therapy-focused compendium to support treatment recommendations in precision oncology
por: Lin, Frank P., et al.
Publicado: (2021)

MIKB: A manually curated and comprehensive knowledge base for myocardial infarction
por: Zhan, Chaoying, et al.
Publicado: (2021)

A comprehensive manually curated reaction map of RANKL/RANK-signaling pathway
por: Raju, Rajesh, et al.
Publicado: (2011)

Expression of the Bovine NK-Lysin Gene Family and Activity against Respiratory Pathogens
por: Chen, Junfeng, et al.
Publicado: (2016)

Identification of genomic regions associated with feed efficiency in Nelore cattle
por: de Oliveira, Priscila SN, et al.
Publicado: (2014)

Data from proteomic analysis of bovine Longissimus dorsi muscle associated with intramuscular fat content
por: Poleti, Mirele D., et al.
Publicado: (2018)

Circad: a comprehensive manually curated resource of circular RNA associated with diseases
por: Rophina, Mercy, et al.
Publicado: (2020)

Bayesian compendium
por: van Oijen, Marcel
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_0ac2rk8fqa784q8qleklvgu91s