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Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites

Genetic individualization based on non-invasive sampling is crucial for estimating the numbers of individuals in endangered mammalian populations. In sable (Martes zibellina)-poaching cases, identifying the number of animals involved is critical for determining the penalty. In addition, investigatin...

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Autores principales: Li, Bo, Wu, Dan, Cai, Yingying, Vladimir G, Monakhov, Zhang, Wei, Xu, Yanchun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6138352/
https://www.ncbi.nlm.nih.gov/pubmed/30460105
http://dx.doi.org/10.1080/19768354.2018.1494039
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author Li, Bo
Wu, Dan
Cai, Yingying
Vladimir G, Monakhov
Zhang, Wei
Xu, Yanchun
author_facet Li, Bo
Wu, Dan
Cai, Yingying
Vladimir G, Monakhov
Zhang, Wei
Xu, Yanchun
author_sort Li, Bo
collection PubMed
description Genetic individualization based on non-invasive sampling is crucial for estimating the numbers of individuals in endangered mammalian populations. In sable (Martes zibellina)-poaching cases, identifying the number of animals involved is critical for determining the penalty. In addition, investigating animal numbers for wild sable populations requires genetic individualization when collecting several samples in neighboring regions. Microsatellites have been demonstrated to be reliable markers for individual identification. Thirty-three microsatellite loci derived from Mustelidae were selected to develop a genetic individualization method for sable. Three reference populations containing 54 unrelated sables were used to calculate allele number, allelic frequencies, and the polymorphic information content of each locus. The data were subsequently used to assess the validity of a combination of twelve loci for sable individualization. We defined twelve polymorphic loci that were easy to be amplified and genotyped. Four significant deviations from Hardy-Weinberg equilibrium were observed among the 12 loci in the three populations. The match probability of an individual from the reference populations with a random individual based on the 12 loci was 1.37 × 10(−13). Using the combination of the twelve loci provides sufficient power to individualize sables considering the levels of microsatellite polymorphism observed. These loci were successfully applied to a case of sable poaching and provided valid evidence to determine the penalty. The genetic individualization of sable based on these loci might also be useful to investigate the numbers of animals in wild populations.
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spelling pubmed-61383522018-11-20 Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites Li, Bo Wu, Dan Cai, Yingying Vladimir G, Monakhov Zhang, Wei Xu, Yanchun Anim Cells Syst (Seoul) Articles Genetic individualization based on non-invasive sampling is crucial for estimating the numbers of individuals in endangered mammalian populations. In sable (Martes zibellina)-poaching cases, identifying the number of animals involved is critical for determining the penalty. In addition, investigating animal numbers for wild sable populations requires genetic individualization when collecting several samples in neighboring regions. Microsatellites have been demonstrated to be reliable markers for individual identification. Thirty-three microsatellite loci derived from Mustelidae were selected to develop a genetic individualization method for sable. Three reference populations containing 54 unrelated sables were used to calculate allele number, allelic frequencies, and the polymorphic information content of each locus. The data were subsequently used to assess the validity of a combination of twelve loci for sable individualization. We defined twelve polymorphic loci that were easy to be amplified and genotyped. Four significant deviations from Hardy-Weinberg equilibrium were observed among the 12 loci in the three populations. The match probability of an individual from the reference populations with a random individual based on the 12 loci was 1.37 × 10(−13). Using the combination of the twelve loci provides sufficient power to individualize sables considering the levels of microsatellite polymorphism observed. These loci were successfully applied to a case of sable poaching and provided valid evidence to determine the penalty. The genetic individualization of sable based on these loci might also be useful to investigate the numbers of animals in wild populations. Taylor & Francis 2018-07-09 /pmc/articles/PMC6138352/ /pubmed/30460105 http://dx.doi.org/10.1080/19768354.2018.1494039 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Li, Bo
Wu, Dan
Cai, Yingying
Vladimir G, Monakhov
Zhang, Wei
Xu, Yanchun
Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites
title Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites
title_full Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites
title_fullStr Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites
title_full_unstemmed Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites
title_short Genetic individualization of sable (Martes zibellina L. 1758) using microsatellites
title_sort genetic individualization of sable (martes zibellina l. 1758) using microsatellites
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6138352/
https://www.ncbi.nlm.nih.gov/pubmed/30460105
http://dx.doi.org/10.1080/19768354.2018.1494039
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