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Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed

The complete genome sequence data of S. aureus SJTUF_J27 isolated from seaweed in China is reported here. The size of the genome is 2.8 Mbp with 32.9% G + C content, consisting of 2614 coding sequences and 77 RNAs. A number of virulence factors, including antimicrobial resistance genes (fluoroquinol...

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Autores principales: Xie, Yanping, He, Yiping, Ghatak, Sandeep, Irwin, Peter, Yan, Xianghe, Strobaugh, Jr., Terence P., Gehring, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6138985/
https://www.ncbi.nlm.nih.gov/pubmed/30225298
http://dx.doi.org/10.1016/j.dib.2018.08.084
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author Xie, Yanping
He, Yiping
Ghatak, Sandeep
Irwin, Peter
Yan, Xianghe
Strobaugh, Jr., Terence P.
Gehring, Andrew
author_facet Xie, Yanping
He, Yiping
Ghatak, Sandeep
Irwin, Peter
Yan, Xianghe
Strobaugh, Jr., Terence P.
Gehring, Andrew
author_sort Xie, Yanping
collection PubMed
description The complete genome sequence data of S. aureus SJTUF_J27 isolated from seaweed in China is reported here. The size of the genome is 2.8 Mbp with 32.9% G + C content, consisting of 2614 coding sequences and 77 RNAs. A number of virulence factors, including antimicrobial resistance genes (fluoroquinolone, beta-lactams, fosfomycin, mupirocin, trimethoprim, and aminocoumarin) and the egc enterotoxin cluster, were found in the genome. In addition, the genes encoding metal-binding proteins and associated heavy metal resistance were identified. Phylogenetic data analysis, based upon genome-wide single nucleotide polymorphisms (SNPs), and comparative genomic evaluation with BLAST Ring Image Generator (BRIG) were performed for SJTUF_J27 and four S. aureus strains isolated from food. The completed genome data was deposited in NCBI׳s GenBank under the accession number CP019117, https://www.ncbi.nlm.nih.gov/nuccore/CP019117.
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spelling pubmed-61389852018-09-17 Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed Xie, Yanping He, Yiping Ghatak, Sandeep Irwin, Peter Yan, Xianghe Strobaugh, Jr., Terence P. Gehring, Andrew Data Brief Genetics, Genomics and Molecular Biology The complete genome sequence data of S. aureus SJTUF_J27 isolated from seaweed in China is reported here. The size of the genome is 2.8 Mbp with 32.9% G + C content, consisting of 2614 coding sequences and 77 RNAs. A number of virulence factors, including antimicrobial resistance genes (fluoroquinolone, beta-lactams, fosfomycin, mupirocin, trimethoprim, and aminocoumarin) and the egc enterotoxin cluster, were found in the genome. In addition, the genes encoding metal-binding proteins and associated heavy metal resistance were identified. Phylogenetic data analysis, based upon genome-wide single nucleotide polymorphisms (SNPs), and comparative genomic evaluation with BLAST Ring Image Generator (BRIG) were performed for SJTUF_J27 and four S. aureus strains isolated from food. The completed genome data was deposited in NCBI׳s GenBank under the accession number CP019117, https://www.ncbi.nlm.nih.gov/nuccore/CP019117. Elsevier 2018-08-30 /pmc/articles/PMC6138985/ /pubmed/30225298 http://dx.doi.org/10.1016/j.dib.2018.08.084 Text en http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Xie, Yanping
He, Yiping
Ghatak, Sandeep
Irwin, Peter
Yan, Xianghe
Strobaugh, Jr., Terence P.
Gehring, Andrew
Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed
title Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed
title_full Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed
title_fullStr Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed
title_full_unstemmed Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed
title_short Whole-genome sequence data and analysis of a Staphylococcus aureus strain SJTUF_J27 isolated from seaweed
title_sort whole-genome sequence data and analysis of a staphylococcus aureus strain sjtuf_j27 isolated from seaweed
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6138985/
https://www.ncbi.nlm.nih.gov/pubmed/30225298
http://dx.doi.org/10.1016/j.dib.2018.08.084
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