A comprehensive annotation for the root-knot nematode Meloidogyne incognita proteome data

Root-knot nematodes are devastating pathogens of crop plants. The draft genome of southern root-knot nematode Meloidogyne incognita was published in 2008 and additional genome and transcriptome data became available later on. However, lack of a publically available annotation for M. incognita genome...

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Detalles Bibliográficos
Autores principales: Somvanshi, Vishal Singh, Ghosh, Olivia, Budhwar, Roli, Dubay, Bhoomika, Shukla, Rohit Nandan, Rao, Uma
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Genetics, Genomics and Molecular Biology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6140804/
https://www.ncbi.nlm.nih.gov/pubmed/30228995
http://dx.doi.org/10.1016/j.dib.2018.05.131
Descripción
Sumario:Root-knot nematodes are devastating pathogens of crop plants. The draft genome of southern root-knot nematode Meloidogyne incognita was published in 2008 and additional genome and transcriptome data became available later on. However, lack of a publically available annotation for M. incognita genome and transcriptome(s) limits the use of this data for functional and comparative genomics by the interested researchers. Here we present a comprehensive annotation for the M. incognita proteome data available at INRA Meloidogyne Genomic Resources page (https://meloidogyne.inra.fr/Downloads/Meloidogyne-incognita-V2-2017) and European Nucleotide Archive (ENA) (accession number: ERP009887) using a multi-pronged approach.

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