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Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature

The data presented here are related to the research article entitled “Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)” [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using...

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Detalles Bibliográficos
Autores principales: Jeong, Ji-Min, Jeswin, Joseph, Bae, Jin-Sol, Park, Chan-Il
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141370/
https://www.ncbi.nlm.nih.gov/pubmed/30229076
http://dx.doi.org/10.1016/j.dib.2018.06.085
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author Jeong, Ji-Min
Jeswin, Joseph
Bae, Jin-Sol
Park, Chan-Il
author_facet Jeong, Ji-Min
Jeswin, Joseph
Bae, Jin-Sol
Park, Chan-Il
author_sort Jeong, Ji-Min
collection PubMed
description The data presented here are related to the research article entitled “Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)” [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis of VHSV infected head kidney samples showed perturbations in gene expression. Herein we made a comparison of DEGs at early stage of VHSV infection of olive flounder (4 h post infection) in colder (13 °C) and warmer (20 °C) temperatures. The analysis of signaling pathways showed that several major immune pathways were altered. The gene ontology terms associated with the genes differentially expressed are also presented.
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spelling pubmed-61413702018-09-18 Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature Jeong, Ji-Min Jeswin, Joseph Bae, Jin-Sol Park, Chan-Il Data Brief Genetics, Genomics and Molecular Biology The data presented here are related to the research article entitled “Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)” [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis of VHSV infected head kidney samples showed perturbations in gene expression. Herein we made a comparison of DEGs at early stage of VHSV infection of olive flounder (4 h post infection) in colder (13 °C) and warmer (20 °C) temperatures. The analysis of signaling pathways showed that several major immune pathways were altered. The gene ontology terms associated with the genes differentially expressed are also presented. Elsevier 2018-06-28 /pmc/articles/PMC6141370/ /pubmed/30229076 http://dx.doi.org/10.1016/j.dib.2018.06.085 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Jeong, Ji-Min
Jeswin, Joseph
Bae, Jin-Sol
Park, Chan-Il
Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature
title Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature
title_full Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature
title_fullStr Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature
title_full_unstemmed Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature
title_short Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature
title_sort differential expression of olive flounder (paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (vhsv) infection at warmer and colder temperature
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141370/
https://www.ncbi.nlm.nih.gov/pubmed/30229076
http://dx.doi.org/10.1016/j.dib.2018.06.085
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