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Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature
The data presented here are related to the research article entitled “Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)” [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141370/ https://www.ncbi.nlm.nih.gov/pubmed/30229076 http://dx.doi.org/10.1016/j.dib.2018.06.085 |
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author | Jeong, Ji-Min Jeswin, Joseph Bae, Jin-Sol Park, Chan-Il |
author_facet | Jeong, Ji-Min Jeswin, Joseph Bae, Jin-Sol Park, Chan-Il |
author_sort | Jeong, Ji-Min |
collection | PubMed |
description | The data presented here are related to the research article entitled “Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)” [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis of VHSV infected head kidney samples showed perturbations in gene expression. Herein we made a comparison of DEGs at early stage of VHSV infection of olive flounder (4 h post infection) in colder (13 °C) and warmer (20 °C) temperatures. The analysis of signaling pathways showed that several major immune pathways were altered. The gene ontology terms associated with the genes differentially expressed are also presented. |
format | Online Article Text |
id | pubmed-6141370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-61413702018-09-18 Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature Jeong, Ji-Min Jeswin, Joseph Bae, Jin-Sol Park, Chan-Il Data Brief Genetics, Genomics and Molecular Biology The data presented here are related to the research article entitled “Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)” [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis of VHSV infected head kidney samples showed perturbations in gene expression. Herein we made a comparison of DEGs at early stage of VHSV infection of olive flounder (4 h post infection) in colder (13 °C) and warmer (20 °C) temperatures. The analysis of signaling pathways showed that several major immune pathways were altered. The gene ontology terms associated with the genes differentially expressed are also presented. Elsevier 2018-06-28 /pmc/articles/PMC6141370/ /pubmed/30229076 http://dx.doi.org/10.1016/j.dib.2018.06.085 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Jeong, Ji-Min Jeswin, Joseph Bae, Jin-Sol Park, Chan-Il Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature |
title | Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature |
title_full | Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature |
title_fullStr | Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature |
title_full_unstemmed | Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature |
title_short | Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperature |
title_sort | differential expression of olive flounder (paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (vhsv) infection at warmer and colder temperature |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141370/ https://www.ncbi.nlm.nih.gov/pubmed/30229076 http://dx.doi.org/10.1016/j.dib.2018.06.085 |
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