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Computational measurement of tumor immune microenvironment in gastric adenocarcinomas

The use of four groups of tumor immune microenvironments (TME) based on PD-L1 and tumor-infiltrating T lymphocytes (TIL) is a reliable biomarker for anti-PD-1/PD-L1 inhibitor therapy. We classified the TME in 241 gastric cancers which were subdivided according to 40 EBV+, 76 microsatellite instabili...

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Autores principales: Chang, Young Hwan, Heo, You Jeong, Cho, Junhun, Song, Sang Yong, Lee, Jeeyun, Kim, Kyoung-Mee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141531/
https://www.ncbi.nlm.nih.gov/pubmed/30224753
http://dx.doi.org/10.1038/s41598-018-32299-0
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author Chang, Young Hwan
Heo, You Jeong
Cho, Junhun
Song, Sang Yong
Lee, Jeeyun
Kim, Kyoung-Mee
author_facet Chang, Young Hwan
Heo, You Jeong
Cho, Junhun
Song, Sang Yong
Lee, Jeeyun
Kim, Kyoung-Mee
author_sort Chang, Young Hwan
collection PubMed
description The use of four groups of tumor immune microenvironments (TME) based on PD-L1 and tumor-infiltrating T lymphocytes (TIL) is a reliable biomarker for anti-PD-1/PD-L1 inhibitor therapy. We classified the TME in 241 gastric cancers which were subdivided according to 40 EBV+, 76 microsatellite instability-high (MSI-H), and 125 EBV-/microsatellite-stable (MSS) subtypes by quantitative image analysis (QIA) and correlated the results with mRNA expression levels. The mean PD-L1 ratio and CD8 ratio in EBV+, MSI-H, and EBV−/MSS GCs were significantly different (P < 0.006). The PD-L1 ratio and CD8 ratio obtained by QIA correlated well with the RNA levels of PD-L1 (r = 0.63) and CD8 (r = 0.67), respectively. The TME were type I (PD-L1(H)/CD8(H)) in 45, type II (PD-L1(L)/CD8(L)) in 106, type III (PD-L1(H)/CD8(L)) in 8, and type IV (PD-L1(L)/CD8(H)) in 82 cases. The type I TME was significantly associated with high TIL (P = 3.0E-11) and EBV+ status (P = 8.55E-08). In conclusion, QIA results correlated well with the mRNA expression levels and classified TME of gastric cancers.
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spelling pubmed-61415312018-09-20 Computational measurement of tumor immune microenvironment in gastric adenocarcinomas Chang, Young Hwan Heo, You Jeong Cho, Junhun Song, Sang Yong Lee, Jeeyun Kim, Kyoung-Mee Sci Rep Article The use of four groups of tumor immune microenvironments (TME) based on PD-L1 and tumor-infiltrating T lymphocytes (TIL) is a reliable biomarker for anti-PD-1/PD-L1 inhibitor therapy. We classified the TME in 241 gastric cancers which were subdivided according to 40 EBV+, 76 microsatellite instability-high (MSI-H), and 125 EBV-/microsatellite-stable (MSS) subtypes by quantitative image analysis (QIA) and correlated the results with mRNA expression levels. The mean PD-L1 ratio and CD8 ratio in EBV+, MSI-H, and EBV−/MSS GCs were significantly different (P < 0.006). The PD-L1 ratio and CD8 ratio obtained by QIA correlated well with the RNA levels of PD-L1 (r = 0.63) and CD8 (r = 0.67), respectively. The TME were type I (PD-L1(H)/CD8(H)) in 45, type II (PD-L1(L)/CD8(L)) in 106, type III (PD-L1(H)/CD8(L)) in 8, and type IV (PD-L1(L)/CD8(H)) in 82 cases. The type I TME was significantly associated with high TIL (P = 3.0E-11) and EBV+ status (P = 8.55E-08). In conclusion, QIA results correlated well with the mRNA expression levels and classified TME of gastric cancers. Nature Publishing Group UK 2018-09-17 /pmc/articles/PMC6141531/ /pubmed/30224753 http://dx.doi.org/10.1038/s41598-018-32299-0 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Chang, Young Hwan
Heo, You Jeong
Cho, Junhun
Song, Sang Yong
Lee, Jeeyun
Kim, Kyoung-Mee
Computational measurement of tumor immune microenvironment in gastric adenocarcinomas
title Computational measurement of tumor immune microenvironment in gastric adenocarcinomas
title_full Computational measurement of tumor immune microenvironment in gastric adenocarcinomas
title_fullStr Computational measurement of tumor immune microenvironment in gastric adenocarcinomas
title_full_unstemmed Computational measurement of tumor immune microenvironment in gastric adenocarcinomas
title_short Computational measurement of tumor immune microenvironment in gastric adenocarcinomas
title_sort computational measurement of tumor immune microenvironment in gastric adenocarcinomas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141531/
https://www.ncbi.nlm.nih.gov/pubmed/30224753
http://dx.doi.org/10.1038/s41598-018-32299-0
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