Cargando…

Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin

This data article contains the truncated view of the transition states for methyl radical attacking camptothecin at the site of 9, 10, 11, 12 and 14 in acidic conditions obtained from quantum computation of Gaussian 09 with B3LYP/6–31+G(d,p) level, also the truncated view of transition states for H...

Descripción completa

Detalles Bibliográficos
Autores principales: Dai, Yujie, Hua, Qingyuan, Ling, Jun, Shao, Chunfu, Zhong, Cheng, Zhang, Xiuli, Hu, Yanying, Zhang, Liming, Liu, Yaotian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141799/
https://www.ncbi.nlm.nih.gov/pubmed/30246097
http://dx.doi.org/10.1016/j.dib.2018.07.004
_version_ 1783355773770792960
author Dai, Yujie
Hua, Qingyuan
Ling, Jun
Shao, Chunfu
Zhong, Cheng
Zhang, Xiuli
Hu, Yanying
Zhang, Liming
Liu, Yaotian
author_facet Dai, Yujie
Hua, Qingyuan
Ling, Jun
Shao, Chunfu
Zhong, Cheng
Zhang, Xiuli
Hu, Yanying
Zhang, Liming
Liu, Yaotian
author_sort Dai, Yujie
collection PubMed
description This data article contains the truncated view of the transition states for methyl radical attacking camptothecin at the site of 9, 10, 11, 12 and 14 in acidic conditions obtained from quantum computation of Gaussian 09 with B3LYP/6–31+G(d,p) level, also the truncated view of transition states for H abstraction by singlet O(2) from sites of 9, 10, 11 and 12 of the intermediates of methyl combination with camptothecin and that by triplet O(2) from site 9 of the intermediate of methyl combination with camptothecin in acidic condition are included. The corresponding parameters of reaction rate constant calculation for the formation of methyl radical from acetaldehyde, the first and second step of radical substitution of camptothecin under acidic conditions are listed. The data of the basic parameters for the computation of the total energy of the spin-projection of singlet oxygen, and the S(2) values for the reactants, transition states and intermediates in the free radical substitution reaction of camptothecin are also included.
format Online
Article
Text
id pubmed-6141799
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-61417992018-09-21 Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin Dai, Yujie Hua, Qingyuan Ling, Jun Shao, Chunfu Zhong, Cheng Zhang, Xiuli Hu, Yanying Zhang, Liming Liu, Yaotian Data Brief Chemistry This data article contains the truncated view of the transition states for methyl radical attacking camptothecin at the site of 9, 10, 11, 12 and 14 in acidic conditions obtained from quantum computation of Gaussian 09 with B3LYP/6–31+G(d,p) level, also the truncated view of transition states for H abstraction by singlet O(2) from sites of 9, 10, 11 and 12 of the intermediates of methyl combination with camptothecin and that by triplet O(2) from site 9 of the intermediate of methyl combination with camptothecin in acidic condition are included. The corresponding parameters of reaction rate constant calculation for the formation of methyl radical from acetaldehyde, the first and second step of radical substitution of camptothecin under acidic conditions are listed. The data of the basic parameters for the computation of the total energy of the spin-projection of singlet oxygen, and the S(2) values for the reactants, transition states and intermediates in the free radical substitution reaction of camptothecin are also included. Elsevier 2018-07-09 /pmc/articles/PMC6141799/ /pubmed/30246097 http://dx.doi.org/10.1016/j.dib.2018.07.004 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Chemistry
Dai, Yujie
Hua, Qingyuan
Ling, Jun
Shao, Chunfu
Zhong, Cheng
Zhang, Xiuli
Hu, Yanying
Zhang, Liming
Liu, Yaotian
Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
title Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
title_full Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
title_fullStr Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
title_full_unstemmed Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
title_short Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
title_sort supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141799/
https://www.ncbi.nlm.nih.gov/pubmed/30246097
http://dx.doi.org/10.1016/j.dib.2018.07.004
work_keys_str_mv AT daiyujie supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT huaqingyuan supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT lingjun supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT shaochunfu supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT zhongcheng supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT zhangxiuli supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT huyanying supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT zhangliming supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin
AT liuyaotian supplementarydataforthequantumchemicalcalculationoffreeradicalsubstitutionreactionmechanismofcamptothecin