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Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin
This data article contains the truncated view of the transition states for methyl radical attacking camptothecin at the site of 9, 10, 11, 12 and 14 in acidic conditions obtained from quantum computation of Gaussian 09 with B3LYP/6–31+G(d,p) level, also the truncated view of transition states for H...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141799/ https://www.ncbi.nlm.nih.gov/pubmed/30246097 http://dx.doi.org/10.1016/j.dib.2018.07.004 |
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author | Dai, Yujie Hua, Qingyuan Ling, Jun Shao, Chunfu Zhong, Cheng Zhang, Xiuli Hu, Yanying Zhang, Liming Liu, Yaotian |
author_facet | Dai, Yujie Hua, Qingyuan Ling, Jun Shao, Chunfu Zhong, Cheng Zhang, Xiuli Hu, Yanying Zhang, Liming Liu, Yaotian |
author_sort | Dai, Yujie |
collection | PubMed |
description | This data article contains the truncated view of the transition states for methyl radical attacking camptothecin at the site of 9, 10, 11, 12 and 14 in acidic conditions obtained from quantum computation of Gaussian 09 with B3LYP/6–31+G(d,p) level, also the truncated view of transition states for H abstraction by singlet O(2) from sites of 9, 10, 11 and 12 of the intermediates of methyl combination with camptothecin and that by triplet O(2) from site 9 of the intermediate of methyl combination with camptothecin in acidic condition are included. The corresponding parameters of reaction rate constant calculation for the formation of methyl radical from acetaldehyde, the first and second step of radical substitution of camptothecin under acidic conditions are listed. The data of the basic parameters for the computation of the total energy of the spin-projection of singlet oxygen, and the S(2) values for the reactants, transition states and intermediates in the free radical substitution reaction of camptothecin are also included. |
format | Online Article Text |
id | pubmed-6141799 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-61417992018-09-21 Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin Dai, Yujie Hua, Qingyuan Ling, Jun Shao, Chunfu Zhong, Cheng Zhang, Xiuli Hu, Yanying Zhang, Liming Liu, Yaotian Data Brief Chemistry This data article contains the truncated view of the transition states for methyl radical attacking camptothecin at the site of 9, 10, 11, 12 and 14 in acidic conditions obtained from quantum computation of Gaussian 09 with B3LYP/6–31+G(d,p) level, also the truncated view of transition states for H abstraction by singlet O(2) from sites of 9, 10, 11 and 12 of the intermediates of methyl combination with camptothecin and that by triplet O(2) from site 9 of the intermediate of methyl combination with camptothecin in acidic condition are included. The corresponding parameters of reaction rate constant calculation for the formation of methyl radical from acetaldehyde, the first and second step of radical substitution of camptothecin under acidic conditions are listed. The data of the basic parameters for the computation of the total energy of the spin-projection of singlet oxygen, and the S(2) values for the reactants, transition states and intermediates in the free radical substitution reaction of camptothecin are also included. Elsevier 2018-07-09 /pmc/articles/PMC6141799/ /pubmed/30246097 http://dx.doi.org/10.1016/j.dib.2018.07.004 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Chemistry Dai, Yujie Hua, Qingyuan Ling, Jun Shao, Chunfu Zhong, Cheng Zhang, Xiuli Hu, Yanying Zhang, Liming Liu, Yaotian Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin |
title | Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin |
title_full | Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin |
title_fullStr | Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin |
title_full_unstemmed | Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin |
title_short | Supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin |
title_sort | supplementary data for the quantum chemical calculation of free radical substitution reaction mechanism of camptothecin |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141799/ https://www.ncbi.nlm.nih.gov/pubmed/30246097 http://dx.doi.org/10.1016/j.dib.2018.07.004 |
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