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Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia

Curcuma alismatifolia, is an Asian crop from Zingiberaceae family, popularly used as ornamental plant in floriculture industry of Thailand and Cambodia. Different varieties with a wide range of colors can be found in species. Until now, few breeding programs have been done on this species and most c...

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Autores principales: Taheri, Sima, Abdullah, Thohirah Lee, Noor, Yusuf Muhammad, Padil, Hirzahida Mohd, Sahebi, Mahbod, Azizi, Parisa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141965/
https://www.ncbi.nlm.nih.gov/pubmed/30246104
http://dx.doi.org/10.1016/j.dib.2018.07.038
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author Taheri, Sima
Abdullah, Thohirah Lee
Noor, Yusuf Muhammad
Padil, Hirzahida Mohd
Sahebi, Mahbod
Azizi, Parisa
author_facet Taheri, Sima
Abdullah, Thohirah Lee
Noor, Yusuf Muhammad
Padil, Hirzahida Mohd
Sahebi, Mahbod
Azizi, Parisa
author_sort Taheri, Sima
collection PubMed
description Curcuma alismatifolia, is an Asian crop from Zingiberaceae family, popularly used as ornamental plant in floriculture industry of Thailand and Cambodia. Different varieties with a wide range of colors can be found in species. Until now, few breeding programs have been done on this species and most commercially important cultivars are hybrids that are propagated vegetatively. In spite of other flowering plants, there is still lack of transcriptomic-based data on the functions of genes related to flower color in C. alismatifolia. The raw data presented in this article provides information on new original transcriptome data of two cultivars of C. alismatifolia by Illumina Hiseq. 4000 RNA-Seq technology which is the first ever report about this plant. The data is accessible via European Nucleotide Archive (ENA) under project number PRJEB18956.
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spelling pubmed-61419652018-09-21 Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia Taheri, Sima Abdullah, Thohirah Lee Noor, Yusuf Muhammad Padil, Hirzahida Mohd Sahebi, Mahbod Azizi, Parisa Data Brief Agricultural and Biological Science Curcuma alismatifolia, is an Asian crop from Zingiberaceae family, popularly used as ornamental plant in floriculture industry of Thailand and Cambodia. Different varieties with a wide range of colors can be found in species. Until now, few breeding programs have been done on this species and most commercially important cultivars are hybrids that are propagated vegetatively. In spite of other flowering plants, there is still lack of transcriptomic-based data on the functions of genes related to flower color in C. alismatifolia. The raw data presented in this article provides information on new original transcriptome data of two cultivars of C. alismatifolia by Illumina Hiseq. 4000 RNA-Seq technology which is the first ever report about this plant. The data is accessible via European Nucleotide Archive (ENA) under project number PRJEB18956. Elsevier 2018-07-24 /pmc/articles/PMC6141965/ /pubmed/30246104 http://dx.doi.org/10.1016/j.dib.2018.07.038 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Taheri, Sima
Abdullah, Thohirah Lee
Noor, Yusuf Muhammad
Padil, Hirzahida Mohd
Sahebi, Mahbod
Azizi, Parisa
Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia
title Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia
title_full Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia
title_fullStr Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia
title_full_unstemmed Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia
title_short Data of the first de novo transcriptome assembly of the inflorescence of Curcuma alismatifolia
title_sort data of the first de novo transcriptome assembly of the inflorescence of curcuma alismatifolia
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6141965/
https://www.ncbi.nlm.nih.gov/pubmed/30246104
http://dx.doi.org/10.1016/j.dib.2018.07.038
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