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Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education

Biological specimens are primary records of organismal ecology and history. As such, museum collections are invaluable repositories for testing ecological and evolutionary hypotheses across the tree of life. Digitizing and broadly sharing the phenotypic data from these collections serves to expand t...

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Detalles Bibliográficos
Autores principales: Shi, Jeff J., Westeen, Erin P., Rabosky, Daniel L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143191/
https://www.ncbi.nlm.nih.gov/pubmed/30226875
http://dx.doi.org/10.1371/journal.pone.0203022
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author Shi, Jeff J.
Westeen, Erin P.
Rabosky, Daniel L.
author_facet Shi, Jeff J.
Westeen, Erin P.
Rabosky, Daniel L.
author_sort Shi, Jeff J.
collection PubMed
description Biological specimens are primary records of organismal ecology and history. As such, museum collections are invaluable repositories for testing ecological and evolutionary hypotheses across the tree of life. Digitizing and broadly sharing the phenotypic data from these collections serves to expand the traditional reach of museums, enabling widespread data sharing, collaboration, and education at an unprecedented scale. In recent years, μCT-scanning has been adopted as one way for efficiently digitizing museum specimens. Here, we describe a large repository of 3D, μCT-scanned images and surfaces of skulls from 359 extant species of bats, a highly diverse clade of modern vertebrates. This digital repository spans much of the taxonomic, biogeographic, and morphological diversity present across bats. All data have been published to the MorphoSource platform, an online database explicitly designed for the archiving of 3D morphological data. We demonstrate one potential use of this repository by testing for convergence in skull shape among one particularly diverse group of bats, the superfamily Noctilionoidea. Beyond its intrinsic utility to bat biologists, our digital specimens represent a resource for educators and for any researchers seeking to broadly test theories of trait evolution, functional ecology, and community assembly.
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spelling pubmed-61431912018-09-27 Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education Shi, Jeff J. Westeen, Erin P. Rabosky, Daniel L. PLoS One Research Article Biological specimens are primary records of organismal ecology and history. As such, museum collections are invaluable repositories for testing ecological and evolutionary hypotheses across the tree of life. Digitizing and broadly sharing the phenotypic data from these collections serves to expand the traditional reach of museums, enabling widespread data sharing, collaboration, and education at an unprecedented scale. In recent years, μCT-scanning has been adopted as one way for efficiently digitizing museum specimens. Here, we describe a large repository of 3D, μCT-scanned images and surfaces of skulls from 359 extant species of bats, a highly diverse clade of modern vertebrates. This digital repository spans much of the taxonomic, biogeographic, and morphological diversity present across bats. All data have been published to the MorphoSource platform, an online database explicitly designed for the archiving of 3D morphological data. We demonstrate one potential use of this repository by testing for convergence in skull shape among one particularly diverse group of bats, the superfamily Noctilionoidea. Beyond its intrinsic utility to bat biologists, our digital specimens represent a resource for educators and for any researchers seeking to broadly test theories of trait evolution, functional ecology, and community assembly. Public Library of Science 2018-09-18 /pmc/articles/PMC6143191/ /pubmed/30226875 http://dx.doi.org/10.1371/journal.pone.0203022 Text en © 2018 Shi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Shi, Jeff J.
Westeen, Erin P.
Rabosky, Daniel L.
Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education
title Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education
title_full Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education
title_fullStr Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education
title_full_unstemmed Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education
title_short Digitizing extant bat diversity: An open-access repository of 3D μCT-scanned skulls for research and education
title_sort digitizing extant bat diversity: an open-access repository of 3d μct-scanned skulls for research and education
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143191/
https://www.ncbi.nlm.nih.gov/pubmed/30226875
http://dx.doi.org/10.1371/journal.pone.0203022
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