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Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal
Adaptive evolution in humans has rarely been characterized for its whole set of components, i.e. selective pressure, adaptive phenotype, beneficial alleles and realized fitness differential. We combined approaches for detecting polygenic adaptations and for mapping the genetic bases of physiological...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143271/ https://www.ncbi.nlm.nih.gov/pubmed/30188897 http://dx.doi.org/10.1371/journal.pgen.1007650 |
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author | Jeong, Choongwon Witonsky, David B. Basnyat, Buddha Neupane, Maniraj Beall, Cynthia M. Childs, Geoff Craig, Sienna R. Novembre, John Di Rienzo, Anna |
author_facet | Jeong, Choongwon Witonsky, David B. Basnyat, Buddha Neupane, Maniraj Beall, Cynthia M. Childs, Geoff Craig, Sienna R. Novembre, John Di Rienzo, Anna |
author_sort | Jeong, Choongwon |
collection | PubMed |
description | Adaptive evolution in humans has rarely been characterized for its whole set of components, i.e. selective pressure, adaptive phenotype, beneficial alleles and realized fitness differential. We combined approaches for detecting polygenic adaptations and for mapping the genetic bases of physiological and fertility phenotypes in approximately 1000 indigenous ethnically Tibetan women from Nepal, adapted to high altitude. The results of genome-wide association analyses and tests for polygenic adaptations showed evidence of positive selection for alleles associated with more pregnancies and live births and evidence of negative selection for those associated with higher offspring mortality. Lower hemoglobin level did not show clear evidence for polygenic adaptation, despite its strong association with an EPAS1 haplotype carrying selective sweep signals. |
format | Online Article Text |
id | pubmed-6143271 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-61432712018-10-19 Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal Jeong, Choongwon Witonsky, David B. Basnyat, Buddha Neupane, Maniraj Beall, Cynthia M. Childs, Geoff Craig, Sienna R. Novembre, John Di Rienzo, Anna PLoS Genet Research Article Adaptive evolution in humans has rarely been characterized for its whole set of components, i.e. selective pressure, adaptive phenotype, beneficial alleles and realized fitness differential. We combined approaches for detecting polygenic adaptations and for mapping the genetic bases of physiological and fertility phenotypes in approximately 1000 indigenous ethnically Tibetan women from Nepal, adapted to high altitude. The results of genome-wide association analyses and tests for polygenic adaptations showed evidence of positive selection for alleles associated with more pregnancies and live births and evidence of negative selection for those associated with higher offspring mortality. Lower hemoglobin level did not show clear evidence for polygenic adaptation, despite its strong association with an EPAS1 haplotype carrying selective sweep signals. Public Library of Science 2018-09-06 /pmc/articles/PMC6143271/ /pubmed/30188897 http://dx.doi.org/10.1371/journal.pgen.1007650 Text en © 2018 Jeong et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Jeong, Choongwon Witonsky, David B. Basnyat, Buddha Neupane, Maniraj Beall, Cynthia M. Childs, Geoff Craig, Sienna R. Novembre, John Di Rienzo, Anna Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal |
title | Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal |
title_full | Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal |
title_fullStr | Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal |
title_full_unstemmed | Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal |
title_short | Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal |
title_sort | detecting past and ongoing natural selection among ethnically tibetan women at high altitude in nepal |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143271/ https://www.ncbi.nlm.nih.gov/pubmed/30188897 http://dx.doi.org/10.1371/journal.pgen.1007650 |
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