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The added value of online user-generated content in traditional methods for influenza surveillance
There has been considerable work in evaluating the efficacy of using online data for health surveillance. Often comparisons with baseline data involve various squared error and correlation metrics. While useful, these overlook a variety of other factors important to public health bodies considering...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143510/ https://www.ncbi.nlm.nih.gov/pubmed/30228285 http://dx.doi.org/10.1038/s41598-018-32029-6 |
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author | Wagner, Moritz Lampos, Vasileios Cox, Ingemar J. Pebody, Richard |
author_facet | Wagner, Moritz Lampos, Vasileios Cox, Ingemar J. Pebody, Richard |
author_sort | Wagner, Moritz |
collection | PubMed |
description | There has been considerable work in evaluating the efficacy of using online data for health surveillance. Often comparisons with baseline data involve various squared error and correlation metrics. While useful, these overlook a variety of other factors important to public health bodies considering the adoption of such methods. In this paper, a proposed surveillance system that incorporates models based on recent research efforts is evaluated in terms of its added value for influenza surveillance at Public Health England. The system comprises of two supervised learning approaches trained on influenza-like illness (ILI) rates provided by the Royal College of General Practitioners (RCGP) and produces ILI estimates using Twitter posts or Google search queries. RCGP ILI rates for different age groups and laboratory confirmed cases by influenza type are used to evaluate the models with a particular focus on predicting the onset, overall intensity, peak activity and duration of the 2015/16 influenza season. We show that the Twitter-based models perform poorly and hypothesise that this is mostly due to the sparsity of the data available and a limited training period. Conversely, the Google-based model provides accurate estimates with timeliness of approximately one week and has the potential to complement current surveillance systems. |
format | Online Article Text |
id | pubmed-6143510 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-61435102018-09-20 The added value of online user-generated content in traditional methods for influenza surveillance Wagner, Moritz Lampos, Vasileios Cox, Ingemar J. Pebody, Richard Sci Rep Article There has been considerable work in evaluating the efficacy of using online data for health surveillance. Often comparisons with baseline data involve various squared error and correlation metrics. While useful, these overlook a variety of other factors important to public health bodies considering the adoption of such methods. In this paper, a proposed surveillance system that incorporates models based on recent research efforts is evaluated in terms of its added value for influenza surveillance at Public Health England. The system comprises of two supervised learning approaches trained on influenza-like illness (ILI) rates provided by the Royal College of General Practitioners (RCGP) and produces ILI estimates using Twitter posts or Google search queries. RCGP ILI rates for different age groups and laboratory confirmed cases by influenza type are used to evaluate the models with a particular focus on predicting the onset, overall intensity, peak activity and duration of the 2015/16 influenza season. We show that the Twitter-based models perform poorly and hypothesise that this is mostly due to the sparsity of the data available and a limited training period. Conversely, the Google-based model provides accurate estimates with timeliness of approximately one week and has the potential to complement current surveillance systems. Nature Publishing Group UK 2018-09-18 /pmc/articles/PMC6143510/ /pubmed/30228285 http://dx.doi.org/10.1038/s41598-018-32029-6 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Wagner, Moritz Lampos, Vasileios Cox, Ingemar J. Pebody, Richard The added value of online user-generated content in traditional methods for influenza surveillance |
title | The added value of online user-generated content in traditional methods for influenza surveillance |
title_full | The added value of online user-generated content in traditional methods for influenza surveillance |
title_fullStr | The added value of online user-generated content in traditional methods for influenza surveillance |
title_full_unstemmed | The added value of online user-generated content in traditional methods for influenza surveillance |
title_short | The added value of online user-generated content in traditional methods for influenza surveillance |
title_sort | added value of online user-generated content in traditional methods for influenza surveillance |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143510/ https://www.ncbi.nlm.nih.gov/pubmed/30228285 http://dx.doi.org/10.1038/s41598-018-32029-6 |
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