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Specific miRNA expression profile in the blood serum of cardiac myxoma patients
The profile of differentially expressed microRNAs (miRNAs) in the serum of patients with cardiac myxoma (CM) (n=30) and healthy people (n=30) was studied using miRNA microarray analysis. The expression of the candidate miRNAs was validated by reverse transcription-quantitative polymerase chain react...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6144211/ https://www.ncbi.nlm.nih.gov/pubmed/30250535 http://dx.doi.org/10.3892/ol.2018.9209 |
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author | Yan, Liangliang Li, Jiahui Wu, Qingsong Chen, Liangwan |
author_facet | Yan, Liangliang Li, Jiahui Wu, Qingsong Chen, Liangwan |
author_sort | Yan, Liangliang |
collection | PubMed |
description | The profile of differentially expressed microRNAs (miRNAs) in the serum of patients with cardiac myxoma (CM) (n=30) and healthy people (n=30) was studied using miRNA microarray analysis. The expression of the candidate miRNAs was validated by reverse transcription-quantitative polymerase chain reaction (RT-qPCR) in the serum of 30 CM patients and 30 healthy control individuals. TargetScan, PicTar and miRanda were used to predict the possible target gene of miR-320a. The Gene Ontology database and Kyoto Encyclopedia of Genes and Genomes database were used to enrich the functions and signaling pathways of the target genes, respectively. The results showed that 4 differentially expressed miRNAs were identified, the expression levels of miR-320a and miR-1249-5p were upregulated, and those of miR-634 and miR-6870-3p were downregulated in CM patients (P<0.05). The expression levels of miR-320a and miR-634 selected for verification by RT-qPCR were in high concordance with the results of microarray analysis. Through bioinformatics, we identified 487 target genes predicted from miR-320a, that were mostly enriched in the bone morphogenetic protein signaling pathway, nicotinamide adenine dinucleotide pathway and de novo ceramide biosynthetic pathway. In our study, we reported for the first time the circulating miRNA profile of CM patients and suggested that miR-320a may participate in CM development through the ceramide signaling pathway. |
format | Online Article Text |
id | pubmed-6144211 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-61442112018-09-24 Specific miRNA expression profile in the blood serum of cardiac myxoma patients Yan, Liangliang Li, Jiahui Wu, Qingsong Chen, Liangwan Oncol Lett Articles The profile of differentially expressed microRNAs (miRNAs) in the serum of patients with cardiac myxoma (CM) (n=30) and healthy people (n=30) was studied using miRNA microarray analysis. The expression of the candidate miRNAs was validated by reverse transcription-quantitative polymerase chain reaction (RT-qPCR) in the serum of 30 CM patients and 30 healthy control individuals. TargetScan, PicTar and miRanda were used to predict the possible target gene of miR-320a. The Gene Ontology database and Kyoto Encyclopedia of Genes and Genomes database were used to enrich the functions and signaling pathways of the target genes, respectively. The results showed that 4 differentially expressed miRNAs were identified, the expression levels of miR-320a and miR-1249-5p were upregulated, and those of miR-634 and miR-6870-3p were downregulated in CM patients (P<0.05). The expression levels of miR-320a and miR-634 selected for verification by RT-qPCR were in high concordance with the results of microarray analysis. Through bioinformatics, we identified 487 target genes predicted from miR-320a, that were mostly enriched in the bone morphogenetic protein signaling pathway, nicotinamide adenine dinucleotide pathway and de novo ceramide biosynthetic pathway. In our study, we reported for the first time the circulating miRNA profile of CM patients and suggested that miR-320a may participate in CM development through the ceramide signaling pathway. D.A. Spandidos 2018-10 2018-07-25 /pmc/articles/PMC6144211/ /pubmed/30250535 http://dx.doi.org/10.3892/ol.2018.9209 Text en Copyright: © Yan et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Yan, Liangliang Li, Jiahui Wu, Qingsong Chen, Liangwan Specific miRNA expression profile in the blood serum of cardiac myxoma patients |
title | Specific miRNA expression profile in the blood serum of cardiac myxoma patients |
title_full | Specific miRNA expression profile in the blood serum of cardiac myxoma patients |
title_fullStr | Specific miRNA expression profile in the blood serum of cardiac myxoma patients |
title_full_unstemmed | Specific miRNA expression profile in the blood serum of cardiac myxoma patients |
title_short | Specific miRNA expression profile in the blood serum of cardiac myxoma patients |
title_sort | specific mirna expression profile in the blood serum of cardiac myxoma patients |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6144211/ https://www.ncbi.nlm.nih.gov/pubmed/30250535 http://dx.doi.org/10.3892/ol.2018.9209 |
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