Cargando…

Entropy-driven DNA logic circuits regulated by DNAzyme

The catalytic DNA circuits play a critical role in engineered biological systems and molecular information processing. Actually, some of the natural or synthetic DNA circuits were triggered by covalent modifications, where conformational changes were induced to facilitate complex DNA engineering fun...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yang, Jing, Wu, Ranfeng, Li, Yifan, Wang, Zhiyu, Pan, Linqiang, Zhang, Qiang, Lu, Zuhong, Zhang, Cheng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2018
Materias:	Nucleic Acid Enzymes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6144864/ https://www.ncbi.nlm.nih.gov/pubmed/30053158 http://dx.doi.org/10.1093/nar/gky663

Ejemplares similares

Allosteric DNAzyme-based DNA logic circuit: operations and dynamic analysis
por: Zheng, Xuedong, et al.
Publicado: (2019)

Zippered G-quadruplex/hemin DNAzyme: exceptional catalyst for universal bioanalytical applications
por: Li, Jia, et al.
Publicado: (2021)

Misfolding of a DNAzyme for ultrahigh sodium selectivity over potassium
por: He, Yanping, et al.
Publicado: (2018)

A DNAzyme requiring two different metal ions at two distinct sites
por: Zhou, Wenhu, et al.
Publicado: (2016)

Switching the activity of Taq polymerase using clamp-like triplex aptamer structure
por: Hu, Yingxin, et al.
Publicado: (2020)

Rational evolution of Cd(2+)-specific DNAzymes with phosphorothioate modified cleavage junction and Cd(2+) sensing
por: Huang, Po-Jung Jimmy, et al.
Publicado: (2015)

A new heavy lanthanide-dependent DNAzyme displaying strong metal cooperativity and unrescuable phosphorothioate effect
por: Huang, Po-Jung Jimmy, et al.
Publicado: (2015)

Dynamical ensemble of the active state and transition state mimic for the RNA-cleaving 8–17 DNAzyme in solution
por: Ekesan, Şölen, et al.
Publicado: (2019)

Insight into G-quadruplex-hemin DNAzyme/RNAzyme: adjacent adenine as the intramolecular species for remarkable enhancement of enzymatic activity
por: Li, Wang, et al.
Publicado: (2016)

From general base to general acid catalysis in a sodium-specific DNAzyme by a guanine-to-adenine mutation
por: Ma, Lingzi, et al.
Publicado: (2019)

Calcium-driven DNA synthesis by a high-fidelity DNA polymerase
por: Ralec, Céline, et al.
Publicado: (2017)

Clerocidin selectively modifies the gyrase-DNA gate to induce irreversible and reversible DNA damage
por: Pan, Xiao Su, et al.
Publicado: (2008)

Selectivity for strand-transfer over 3′-processing and susceptibility to clinical resistance of HIV-1 integrase inhibitors are driven by key enzyme–DNA interactions in the active site
por: Métifiot, Mathieu, et al.
Publicado: (2016)

Efficient DNA ligation in DNA–RNA hybrid helices by Chlorella virus DNA ligase
por: Lohman, Gregory J. S., et al.
Publicado: (2014)

The key DNA-binding residues in the C-terminal domain of Mycobacterium tuberculosis DNA gyrase A subunit (GyrA)
por: Huang, You-Yi, et al.
Publicado: (2006)

Association of Dnmt3a and thymine DNA glycosylase links DNA methylation with base-excision repair
por: Li, Ya-Qiang, et al.
Publicado: (2007)

Chimeric DNA methyltransferases target DNA methylation to specific DNA sequences and repress expression of target genes
por: Li, Fuyang, et al.
Publicado: (2007)

G-quadruplex and G-rich sequence stimulate Pif1p-catalyzed downstream duplex DNA unwinding through reducing waiting time at ss/dsDNA junction
por: Zhang, Bo, et al.
Publicado: (2016)

Functional interplay between SA1 and TRF1 in telomeric DNA binding and DNA–DNA pairing
por: Lin, Jiangguo, et al.
Publicado: (2016)

Evidence for a functional dimeric form of the PcrA helicase in DNA unwinding
por: Yang, Ye, et al.
Publicado: (2008)

Efficient DNA interrogation of SpCas9 governed by its electrostatic interaction with DNA beyond the PAM and protospacer
por: Zhang, Qian, et al.
Publicado: (2021)

The non-specific adenine DNA methyltransferase M.EcoGII
por: Murray, Iain A, et al.
Publicado: (2018)

New DNA-hydrolyzing DNAs isolated from an ssDNA library carrying a terminal hybridization stem
por: Zhang, Canyu, et al.
Publicado: (2021)

Functional determinants of gate-DNA selection and cleavage by bacterial type II topoisomerases
por: Arnoldi, Elisa, et al.
Publicado: (2013)

Structure of HhaI endonuclease with cognate DNA at an atomic resolution of 1.0 Å
por: Horton, John R, et al.
Publicado: (2020)

Small RNA-mediated DNA (cytosine-5) methyltransferase 1 inhibition leads to aberrant DNA methylation
por: Zhang, Guoqiang, et al.
Publicado: (2015)

Regulatory circuit based on autogenous activation-repression: roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system
por: Mruk, Iwona, et al.
Publicado: (2007)

Structure of 5-hydroxymethylcytosine-specific restriction enzyme, AbaSI, in complex with DNA
por: Horton, John R., et al.
Publicado: (2014)

Cmr1 enables efficient RNA and DNA interference of a III-B CRISPR–Cas system by binding to target RNA and crRNA
por: Li, Yingjun, et al.
Publicado: (2017)

Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helix
por: Horton, John R., et al.
Publicado: (2014)

Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease
por: Horton, John R., et al.
Publicado: (2012)

A novel DNA nuclease is stimulated by association with the GINS complex
por: Li, Zhuo, et al.
Publicado: (2011)

DNA rehybridization drives product release from Cas9 ribonucleoprotein to enable multiple-turnover cleavage
por: Pan, Juan, et al.
Publicado: (2023)

Topoisomerase II minimizes DNA entanglements by proofreading DNA topology after DNA strand passage
por: Martínez-García, Belén, et al.
Publicado: (2014)

Promiscuous DNA synthesis by human DNA polymerase θ
por: Hogg, Matthew, et al.
Publicado: (2012)

Mechanism of DNA loading by the DNA repair helicase XPD
por: Constantinescu-Aruxandei, Diana, et al.
Publicado: (2016)

A type III-B CRISPR-Cas effector complex mediating massive target DNA destruction
por: Han, Wenyuan, et al.
Publicado: (2017)

In vitro selection of DNA-cleaving deoxyribozyme with site-specific thymidine excision activity
por: Wang, Mingqi, et al.
Publicado: (2014)

Preferred WMSA catalytic mechanism of the nucleotidyl transfer reaction in human DNA polymerase κ elucidates error-free bypass of a bulky DNA lesion
por: Lior-Hoffmann, Lee, et al.
Publicado: (2012)

Low-fidelity DNA synthesis by human DNA polymerase theta
por: Arana, Mercedes E., et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_vvitusl5hgqgn2iouho6qtbhua