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A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases

One out of every six American women has been the victim of a sexual assault in their lifetime. However, the DNA casework backlog continues to increase outpacing the nation's capacity since DNA evidence processing in sexual assault casework remains a bottleneck due to laborious and time‐consumin...

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Autores principales: Inci, Fatih, Ozen, Mehmet O., Saylan, Yeseren, Miansari, Morteza, Cimen, Duygu, Dhara, Raghu, Chinnasamy, Thiruppathiraja, Yuksekkaya, Mehmet, Filippini, Chiara, Kumar, Deepan Kishore, Calamak, Semih, Yesil, Yusuf, Durmus, Naside Gozde, Duncan, George, Klevan, Leonard, Demirci, Utkan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6145299/
https://www.ncbi.nlm.nih.gov/pubmed/30250782
http://dx.doi.org/10.1002/advs.201800121
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author Inci, Fatih
Ozen, Mehmet O.
Saylan, Yeseren
Miansari, Morteza
Cimen, Duygu
Dhara, Raghu
Chinnasamy, Thiruppathiraja
Yuksekkaya, Mehmet
Filippini, Chiara
Kumar, Deepan Kishore
Calamak, Semih
Yesil, Yusuf
Durmus, Naside Gozde
Duncan, George
Klevan, Leonard
Demirci, Utkan
author_facet Inci, Fatih
Ozen, Mehmet O.
Saylan, Yeseren
Miansari, Morteza
Cimen, Duygu
Dhara, Raghu
Chinnasamy, Thiruppathiraja
Yuksekkaya, Mehmet
Filippini, Chiara
Kumar, Deepan Kishore
Calamak, Semih
Yesil, Yusuf
Durmus, Naside Gozde
Duncan, George
Klevan, Leonard
Demirci, Utkan
author_sort Inci, Fatih
collection PubMed
description One out of every six American women has been the victim of a sexual assault in their lifetime. However, the DNA casework backlog continues to increase outpacing the nation's capacity since DNA evidence processing in sexual assault casework remains a bottleneck due to laborious and time‐consuming differential extraction of victim's and perpetrator's cells. Additionally, a significant amount (60–90%) of male DNA evidence may be lost with existing procedures. Here, a microfluidic method is developed that selectively captures sperm using a unique oligosaccharide sequence (Sialyl‐Lewis(X)), a major carbohydrate ligand for sperm‐egg binding. This method is validated with forensic mock samples dating back to 2003, resulting in 70–92% sperm capture efficiency and a 60–92% reduction in epithelial fraction. Captured sperm are then lysed on‐chip and sperm DNA is isolated. This method reduces assay‐time from 8 h to 80 min, providing an inexpensive alternative to current differential extraction techniques, accelerating identification of suspects and advancing public safety.
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spelling pubmed-61452992018-09-24 A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases Inci, Fatih Ozen, Mehmet O. Saylan, Yeseren Miansari, Morteza Cimen, Duygu Dhara, Raghu Chinnasamy, Thiruppathiraja Yuksekkaya, Mehmet Filippini, Chiara Kumar, Deepan Kishore Calamak, Semih Yesil, Yusuf Durmus, Naside Gozde Duncan, George Klevan, Leonard Demirci, Utkan Adv Sci (Weinh) Full Papers One out of every six American women has been the victim of a sexual assault in their lifetime. However, the DNA casework backlog continues to increase outpacing the nation's capacity since DNA evidence processing in sexual assault casework remains a bottleneck due to laborious and time‐consuming differential extraction of victim's and perpetrator's cells. Additionally, a significant amount (60–90%) of male DNA evidence may be lost with existing procedures. Here, a microfluidic method is developed that selectively captures sperm using a unique oligosaccharide sequence (Sialyl‐Lewis(X)), a major carbohydrate ligand for sperm‐egg binding. This method is validated with forensic mock samples dating back to 2003, resulting in 70–92% sperm capture efficiency and a 60–92% reduction in epithelial fraction. Captured sperm are then lysed on‐chip and sperm DNA is isolated. This method reduces assay‐time from 8 h to 80 min, providing an inexpensive alternative to current differential extraction techniques, accelerating identification of suspects and advancing public safety. John Wiley and Sons Inc. 2018-06-15 /pmc/articles/PMC6145299/ /pubmed/30250782 http://dx.doi.org/10.1002/advs.201800121 Text en © 2018 The Authors. Published by WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Inci, Fatih
Ozen, Mehmet O.
Saylan, Yeseren
Miansari, Morteza
Cimen, Duygu
Dhara, Raghu
Chinnasamy, Thiruppathiraja
Yuksekkaya, Mehmet
Filippini, Chiara
Kumar, Deepan Kishore
Calamak, Semih
Yesil, Yusuf
Durmus, Naside Gozde
Duncan, George
Klevan, Leonard
Demirci, Utkan
A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases
title A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases
title_full A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases
title_fullStr A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases
title_full_unstemmed A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases
title_short A Novel On‐Chip Method for Differential Extraction of Sperm in Forensic Cases
title_sort novel on‐chip method for differential extraction of sperm in forensic cases
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6145299/
https://www.ncbi.nlm.nih.gov/pubmed/30250782
http://dx.doi.org/10.1002/advs.201800121
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