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Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls
Oral cavity squamous cell carcinoma (OCC) and oropharyngeal squamous cell carcinoma (OPC) are among the most common cancers worldwide and are associated with high mortality and morbidity. The purpose of this study is to identify potential biomarkers to distinguish OCC/OPC from normal controls and to...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6147497/ https://www.ncbi.nlm.nih.gov/pubmed/30235319 http://dx.doi.org/10.1371/journal.pone.0204249 |
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author | Lohavanichbutr, Pawadee Zhang, Yuzheng Wang, Pei Gu, Haiwei Nagana Gowda, G. A. Djukovic, Danijel Buas, Matthew F. Raftery, Daniel Chen, Chu |
author_facet | Lohavanichbutr, Pawadee Zhang, Yuzheng Wang, Pei Gu, Haiwei Nagana Gowda, G. A. Djukovic, Danijel Buas, Matthew F. Raftery, Daniel Chen, Chu |
author_sort | Lohavanichbutr, Pawadee |
collection | PubMed |
description | Oral cavity squamous cell carcinoma (OCC) and oropharyngeal squamous cell carcinoma (OPC) are among the most common cancers worldwide and are associated with high mortality and morbidity. The purpose of this study is to identify potential biomarkers to distinguish OCC/OPC from normal controls and to distinguish OCC patients with and without nodal metastasis. We tested saliva samples from 101 OCC, 58 OPC, and 35 normal controls using four analytical platforms (NMR, targeted aqueous by LC-MS/MS, global aqueous and global lipidomics by LC-Q-TOF). Samples from OCC and normal controls were divided into discovery and validation sets. Using linear regression adjusting for age, sex, race and experimental batches, we found the levels of two metabolites (glycine and proline) to be significantly different between OCC and controls (FDR < 0.1 for both discovery and validation sets) but did not find any appreciable differences in metabolite levels between OPC and controls or between OCC with and without nodal metastasis. Four metabolites, including glycine, proline, citrulline, and ornithine were associated with early stage OCC in both discovery and validation sets. Further study is warranted to confirm these results in the development of salivary metabolites as diagnostic markers. |
format | Online Article Text |
id | pubmed-6147497 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-61474972018-10-08 Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls Lohavanichbutr, Pawadee Zhang, Yuzheng Wang, Pei Gu, Haiwei Nagana Gowda, G. A. Djukovic, Danijel Buas, Matthew F. Raftery, Daniel Chen, Chu PLoS One Research Article Oral cavity squamous cell carcinoma (OCC) and oropharyngeal squamous cell carcinoma (OPC) are among the most common cancers worldwide and are associated with high mortality and morbidity. The purpose of this study is to identify potential biomarkers to distinguish OCC/OPC from normal controls and to distinguish OCC patients with and without nodal metastasis. We tested saliva samples from 101 OCC, 58 OPC, and 35 normal controls using four analytical platforms (NMR, targeted aqueous by LC-MS/MS, global aqueous and global lipidomics by LC-Q-TOF). Samples from OCC and normal controls were divided into discovery and validation sets. Using linear regression adjusting for age, sex, race and experimental batches, we found the levels of two metabolites (glycine and proline) to be significantly different between OCC and controls (FDR < 0.1 for both discovery and validation sets) but did not find any appreciable differences in metabolite levels between OPC and controls or between OCC with and without nodal metastasis. Four metabolites, including glycine, proline, citrulline, and ornithine were associated with early stage OCC in both discovery and validation sets. Further study is warranted to confirm these results in the development of salivary metabolites as diagnostic markers. Public Library of Science 2018-09-20 /pmc/articles/PMC6147497/ /pubmed/30235319 http://dx.doi.org/10.1371/journal.pone.0204249 Text en © 2018 Lohavanichbutr et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Lohavanichbutr, Pawadee Zhang, Yuzheng Wang, Pei Gu, Haiwei Nagana Gowda, G. A. Djukovic, Danijel Buas, Matthew F. Raftery, Daniel Chen, Chu Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls |
title | Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls |
title_full | Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls |
title_fullStr | Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls |
title_full_unstemmed | Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls |
title_short | Salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls |
title_sort | salivary metabolite profiling distinguishes patients with oral cavity squamous cell carcinoma from normal controls |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6147497/ https://www.ncbi.nlm.nih.gov/pubmed/30235319 http://dx.doi.org/10.1371/journal.pone.0204249 |
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