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Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony
Intelligent optimization algorithms have advantages in dealing with complex nonlinear problems accompanied by good flexibility and adaptability. In this paper, the FCBF (Fast Correlation-Based Feature selection) method is used to filter irrelevant and redundant features in order to improve the quali...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6149693/ https://www.ncbi.nlm.nih.gov/pubmed/29186052 http://dx.doi.org/10.3390/molecules22122086 |
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author | Gao, Lingyun Ye, Mingquan Wu, Changrong |
author_facet | Gao, Lingyun Ye, Mingquan Wu, Changrong |
author_sort | Gao, Lingyun |
collection | PubMed |
description | Intelligent optimization algorithms have advantages in dealing with complex nonlinear problems accompanied by good flexibility and adaptability. In this paper, the FCBF (Fast Correlation-Based Feature selection) method is used to filter irrelevant and redundant features in order to improve the quality of cancer classification. Then, we perform classification based on SVM (Support Vector Machine) optimized by PSO (Particle Swarm Optimization) combined with ABC (Artificial Bee Colony) approaches, which is represented as PA-SVM. The proposed PA-SVM method is applied to nine cancer datasets, including five datasets of outcome prediction and a protein dataset of ovarian cancer. By comparison with other classification methods, the results demonstrate the effectiveness and the robustness of the proposed PA-SVM method in handling various types of data for cancer classification. |
format | Online Article Text |
id | pubmed-6149693 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-61496932018-11-13 Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony Gao, Lingyun Ye, Mingquan Wu, Changrong Molecules Article Intelligent optimization algorithms have advantages in dealing with complex nonlinear problems accompanied by good flexibility and adaptability. In this paper, the FCBF (Fast Correlation-Based Feature selection) method is used to filter irrelevant and redundant features in order to improve the quality of cancer classification. Then, we perform classification based on SVM (Support Vector Machine) optimized by PSO (Particle Swarm Optimization) combined with ABC (Artificial Bee Colony) approaches, which is represented as PA-SVM. The proposed PA-SVM method is applied to nine cancer datasets, including five datasets of outcome prediction and a protein dataset of ovarian cancer. By comparison with other classification methods, the results demonstrate the effectiveness and the robustness of the proposed PA-SVM method in handling various types of data for cancer classification. MDPI 2017-11-29 /pmc/articles/PMC6149693/ /pubmed/29186052 http://dx.doi.org/10.3390/molecules22122086 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gao, Lingyun Ye, Mingquan Wu, Changrong Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony |
title | Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony |
title_full | Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony |
title_fullStr | Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony |
title_full_unstemmed | Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony |
title_short | Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony |
title_sort | cancer classification based on support vector machine optimized by particle swarm optimization and artificial bee colony |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6149693/ https://www.ncbi.nlm.nih.gov/pubmed/29186052 http://dx.doi.org/10.3390/molecules22122086 |
work_keys_str_mv | AT gaolingyun cancerclassificationbasedonsupportvectormachineoptimizedbyparticleswarmoptimizationandartificialbeecolony AT yemingquan cancerclassificationbasedonsupportvectormachineoptimizedbyparticleswarmoptimizationandartificialbeecolony AT wuchangrong cancerclassificationbasedonsupportvectormachineoptimizedbyparticleswarmoptimizationandartificialbeecolony |