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Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations

The growth and survival of cancer cells are greatly related to their surrounding microenvironment. To understand the regulation under the impact of anti-cancer drugs and their synergistic effects, we have developed a multiscale agent-based model that can investigate the synergistic effects of drug c...

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Detalles Bibliográficos
Autores principales: Gao, Hongjie, Yin, Zuojing, Cao, Zhiwei, Zhang, Le
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6149923/
https://www.ncbi.nlm.nih.gov/pubmed/29240712
http://dx.doi.org/10.3390/molecules22122209
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author Gao, Hongjie
Yin, Zuojing
Cao, Zhiwei
Zhang, Le
author_facet Gao, Hongjie
Yin, Zuojing
Cao, Zhiwei
Zhang, Le
author_sort Gao, Hongjie
collection PubMed
description The growth and survival of cancer cells are greatly related to their surrounding microenvironment. To understand the regulation under the impact of anti-cancer drugs and their synergistic effects, we have developed a multiscale agent-based model that can investigate the synergistic effects of drug combinations with three innovations. First, it explores the synergistic effects of drug combinations in a huge dose combinational space at the cell line level. Second, it can simulate the interaction between cells and their microenvironment. Third, it employs both local and global optimization algorithms to train the key parameters and validate the predictive power of the model by using experimental data. The research results indicate that our multicellular system can not only describe the interactions between the microenvironment and cells in detail, but also predict the synergistic effects of drug combinations.
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spelling pubmed-61499232018-11-13 Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations Gao, Hongjie Yin, Zuojing Cao, Zhiwei Zhang, Le Molecules Article The growth and survival of cancer cells are greatly related to their surrounding microenvironment. To understand the regulation under the impact of anti-cancer drugs and their synergistic effects, we have developed a multiscale agent-based model that can investigate the synergistic effects of drug combinations with three innovations. First, it explores the synergistic effects of drug combinations in a huge dose combinational space at the cell line level. Second, it can simulate the interaction between cells and their microenvironment. Third, it employs both local and global optimization algorithms to train the key parameters and validate the predictive power of the model by using experimental data. The research results indicate that our multicellular system can not only describe the interactions between the microenvironment and cells in detail, but also predict the synergistic effects of drug combinations. MDPI 2017-12-14 /pmc/articles/PMC6149923/ /pubmed/29240712 http://dx.doi.org/10.3390/molecules22122209 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gao, Hongjie
Yin, Zuojing
Cao, Zhiwei
Zhang, Le
Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations
title Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations
title_full Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations
title_fullStr Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations
title_full_unstemmed Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations
title_short Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations
title_sort developing an agent-based drug model to investigate the synergistic effects of drug combinations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6149923/
https://www.ncbi.nlm.nih.gov/pubmed/29240712
http://dx.doi.org/10.3390/molecules22122209
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