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Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations
The growth and survival of cancer cells are greatly related to their surrounding microenvironment. To understand the regulation under the impact of anti-cancer drugs and their synergistic effects, we have developed a multiscale agent-based model that can investigate the synergistic effects of drug c...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6149923/ https://www.ncbi.nlm.nih.gov/pubmed/29240712 http://dx.doi.org/10.3390/molecules22122209 |
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author | Gao, Hongjie Yin, Zuojing Cao, Zhiwei Zhang, Le |
author_facet | Gao, Hongjie Yin, Zuojing Cao, Zhiwei Zhang, Le |
author_sort | Gao, Hongjie |
collection | PubMed |
description | The growth and survival of cancer cells are greatly related to their surrounding microenvironment. To understand the regulation under the impact of anti-cancer drugs and their synergistic effects, we have developed a multiscale agent-based model that can investigate the synergistic effects of drug combinations with three innovations. First, it explores the synergistic effects of drug combinations in a huge dose combinational space at the cell line level. Second, it can simulate the interaction between cells and their microenvironment. Third, it employs both local and global optimization algorithms to train the key parameters and validate the predictive power of the model by using experimental data. The research results indicate that our multicellular system can not only describe the interactions between the microenvironment and cells in detail, but also predict the synergistic effects of drug combinations. |
format | Online Article Text |
id | pubmed-6149923 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-61499232018-11-13 Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations Gao, Hongjie Yin, Zuojing Cao, Zhiwei Zhang, Le Molecules Article The growth and survival of cancer cells are greatly related to their surrounding microenvironment. To understand the regulation under the impact of anti-cancer drugs and their synergistic effects, we have developed a multiscale agent-based model that can investigate the synergistic effects of drug combinations with three innovations. First, it explores the synergistic effects of drug combinations in a huge dose combinational space at the cell line level. Second, it can simulate the interaction between cells and their microenvironment. Third, it employs both local and global optimization algorithms to train the key parameters and validate the predictive power of the model by using experimental data. The research results indicate that our multicellular system can not only describe the interactions between the microenvironment and cells in detail, but also predict the synergistic effects of drug combinations. MDPI 2017-12-14 /pmc/articles/PMC6149923/ /pubmed/29240712 http://dx.doi.org/10.3390/molecules22122209 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gao, Hongjie Yin, Zuojing Cao, Zhiwei Zhang, Le Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations |
title | Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations |
title_full | Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations |
title_fullStr | Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations |
title_full_unstemmed | Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations |
title_short | Developing an Agent-Based Drug Model to Investigate the Synergistic Effects of Drug Combinations |
title_sort | developing an agent-based drug model to investigate the synergistic effects of drug combinations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6149923/ https://www.ncbi.nlm.nih.gov/pubmed/29240712 http://dx.doi.org/10.3390/molecules22122209 |
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