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Brownian Translational Dynamics on a Flexible Surface: Nuclear Spin Relaxation of Fluid Membrane Phases
[Image: see text] A general model for nuclear magnetic resonance (NMR) relaxation studies of fluid bilayer systems is introduced, combining a mesoscopic Brownian dynamics description of the bilayer with atomistic molecular dynamics (MD) simulations. An example is given for dipalmitoylphosphatidylcho...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical Society
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6150728/ https://www.ncbi.nlm.nih.gov/pubmed/29478324 http://dx.doi.org/10.1021/acs.langmuir.7b04156 |
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author | Håkansson, Pär Boirin, Tom Vaara, Juha |
author_facet | Håkansson, Pär Boirin, Tom Vaara, Juha |
author_sort | Håkansson, Pär |
collection | PubMed |
description | [Image: see text] A general model for nuclear magnetic resonance (NMR) relaxation studies of fluid bilayer systems is introduced, combining a mesoscopic Brownian dynamics description of the bilayer with atomistic molecular dynamics (MD) simulations. An example is given for dipalmitoylphosphatidylcholine in (2)H(2)O solvent and compared with the experiment. Experimental agreement is within a factor of 2 in the water relaxation rates, based on a postulated model with fixed parameters, which are largely available from the MD simulation. Relaxation rates are particularly sensitive to the translational diffusion of water perturbed by the interface dynamics and structure. Simulation results suggest that a notable deviation in the relaxation rates may follow from the commonly used small-angle approximation of bilayer undulation. The method has the potential to overcome the temporal and spatial limitations in computing NMR relaxation with atomistic MD, as well as the shortcomings of continuum models enabling a consistent description of experiments performed on a solvent lipid and added spin probes. This work opens for possibilities to understand relaxation processes involving systems such as micelles, multilamellar vesicles, red blood cells, and so forth at biologically relevant timescales in great detail. |
format | Online Article Text |
id | pubmed-6150728 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | American
Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-61507282018-09-24 Brownian Translational Dynamics on a Flexible Surface: Nuclear Spin Relaxation of Fluid Membrane Phases Håkansson, Pär Boirin, Tom Vaara, Juha Langmuir [Image: see text] A general model for nuclear magnetic resonance (NMR) relaxation studies of fluid bilayer systems is introduced, combining a mesoscopic Brownian dynamics description of the bilayer with atomistic molecular dynamics (MD) simulations. An example is given for dipalmitoylphosphatidylcholine in (2)H(2)O solvent and compared with the experiment. Experimental agreement is within a factor of 2 in the water relaxation rates, based on a postulated model with fixed parameters, which are largely available from the MD simulation. Relaxation rates are particularly sensitive to the translational diffusion of water perturbed by the interface dynamics and structure. Simulation results suggest that a notable deviation in the relaxation rates may follow from the commonly used small-angle approximation of bilayer undulation. The method has the potential to overcome the temporal and spatial limitations in computing NMR relaxation with atomistic MD, as well as the shortcomings of continuum models enabling a consistent description of experiments performed on a solvent lipid and added spin probes. This work opens for possibilities to understand relaxation processes involving systems such as micelles, multilamellar vesicles, red blood cells, and so forth at biologically relevant timescales in great detail. American Chemical Society 2018-02-25 2018-03-27 /pmc/articles/PMC6150728/ /pubmed/29478324 http://dx.doi.org/10.1021/acs.langmuir.7b04156 Text en Copyright © 2018 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Håkansson, Pär Boirin, Tom Vaara, Juha Brownian Translational Dynamics on a Flexible Surface: Nuclear Spin Relaxation of Fluid Membrane Phases |
title | Brownian Translational Dynamics on a Flexible Surface:
Nuclear Spin Relaxation of Fluid Membrane Phases |
title_full | Brownian Translational Dynamics on a Flexible Surface:
Nuclear Spin Relaxation of Fluid Membrane Phases |
title_fullStr | Brownian Translational Dynamics on a Flexible Surface:
Nuclear Spin Relaxation of Fluid Membrane Phases |
title_full_unstemmed | Brownian Translational Dynamics on a Flexible Surface:
Nuclear Spin Relaxation of Fluid Membrane Phases |
title_short | Brownian Translational Dynamics on a Flexible Surface:
Nuclear Spin Relaxation of Fluid Membrane Phases |
title_sort | brownian translational dynamics on a flexible surface:
nuclear spin relaxation of fluid membrane phases |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6150728/ https://www.ncbi.nlm.nih.gov/pubmed/29478324 http://dx.doi.org/10.1021/acs.langmuir.7b04156 |
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