Cargando…

Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly

Essential oils extracted from plants are composed of volatile organic compounds that can affect insect behavior. Identifying the active components of the essential oils to their biochemical target is necessary to design novel biopesticides. In this study, essential oils extracted from Diospyros disc...

Descripción completa

Detalles Bibliográficos
Autores principales: Dacanay, Francoise Neil D., Ladra, Ma. Carmina Joyce A., Junio, Hiyas A., Nellas, Ricky B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6151447/
https://www.ncbi.nlm.nih.gov/pubmed/29064449
http://dx.doi.org/10.3390/molecules22101677
_version_ 1783357155590537216
author Dacanay, Francoise Neil D.
Ladra, Ma. Carmina Joyce A.
Junio, Hiyas A.
Nellas, Ricky B.
author_facet Dacanay, Francoise Neil D.
Ladra, Ma. Carmina Joyce A.
Junio, Hiyas A.
Nellas, Ricky B.
author_sort Dacanay, Francoise Neil D.
collection PubMed
description Essential oils extracted from plants are composed of volatile organic compounds that can affect insect behavior. Identifying the active components of the essential oils to their biochemical target is necessary to design novel biopesticides. In this study, essential oils extracted from Diospyros discolor (Willd.) were analyzed using gas chromatography mass spectroscopy (GC-MS) to create an untargeted metabolite profile. Subsequently, a conformational ensemble of the Drosophila melanogaster octopamine receptor in mushroom bodies (OAMB) was created from a molecular dynamics simulation to resemble a flexible receptor for docking studies. GC-MS analysis revealed the presence of several metabolites, i.e. mostly aromatic esters. Interestingly, these aromatic esters were found to exhibit relatively higher binding affinities to OAMB than the receptor’s natural agonist, octopamine. The molecular origin of this observed enhanced affinity is the [Formula: see text]-stacking interaction between the aromatic moieties of the residues and ligands. This strategy, computational inspection in tandem with untargeted metabolomics, may provide insights in screening the essential oils as potential OAMB inhibitors.
format Online
Article
Text
id pubmed-6151447
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-61514472018-11-13 Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly Dacanay, Francoise Neil D. Ladra, Ma. Carmina Joyce A. Junio, Hiyas A. Nellas, Ricky B. Molecules Article Essential oils extracted from plants are composed of volatile organic compounds that can affect insect behavior. Identifying the active components of the essential oils to their biochemical target is necessary to design novel biopesticides. In this study, essential oils extracted from Diospyros discolor (Willd.) were analyzed using gas chromatography mass spectroscopy (GC-MS) to create an untargeted metabolite profile. Subsequently, a conformational ensemble of the Drosophila melanogaster octopamine receptor in mushroom bodies (OAMB) was created from a molecular dynamics simulation to resemble a flexible receptor for docking studies. GC-MS analysis revealed the presence of several metabolites, i.e. mostly aromatic esters. Interestingly, these aromatic esters were found to exhibit relatively higher binding affinities to OAMB than the receptor’s natural agonist, octopamine. The molecular origin of this observed enhanced affinity is the [Formula: see text]-stacking interaction between the aromatic moieties of the residues and ligands. This strategy, computational inspection in tandem with untargeted metabolomics, may provide insights in screening the essential oils as potential OAMB inhibitors. MDPI 2017-10-24 /pmc/articles/PMC6151447/ /pubmed/29064449 http://dx.doi.org/10.3390/molecules22101677 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dacanay, Francoise Neil D.
Ladra, Ma. Carmina Joyce A.
Junio, Hiyas A.
Nellas, Ricky B.
Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly
title Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly
title_full Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly
title_fullStr Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly
title_full_unstemmed Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly
title_short Molecular Affinity of Mabolo Extracts to an Octopamine Receptor of a Fruit Fly
title_sort molecular affinity of mabolo extracts to an octopamine receptor of a fruit fly
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6151447/
https://www.ncbi.nlm.nih.gov/pubmed/29064449
http://dx.doi.org/10.3390/molecules22101677
work_keys_str_mv AT dacanayfrancoiseneild molecularaffinityofmaboloextractstoanoctopaminereceptorofafruitfly
AT ladramacarminajoycea molecularaffinityofmaboloextractstoanoctopaminereceptorofafruitfly
AT juniohiyasa molecularaffinityofmaboloextractstoanoctopaminereceptorofafruitfly
AT nellasrickyb molecularaffinityofmaboloextractstoanoctopaminereceptorofafruitfly